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SCN18_25_8_15_R2_B_scaffold_208

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Displaying items 1-30 of 205 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_208_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106..1365)
DNA (1260bp) protein (420aa)
Gallate dioxygenase {ECO:0000313|EMBL:AKH44064.1}; EC=1.13.11.57 {ECO:0000313|EMBL:AKH44064.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Gallate dioxygenase n=2 Tax=Sphingomonadaceae RepID=G2IKE5_9SPHN
desB; gallate dioxygenase
SCN18_25_8_15_R2_B_scaffold_208_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1569..1820)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WEK4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ27942.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. NAP1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_208_3
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1859..2461)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YB20_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL25345.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_208_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2667..4133
DNA (1467bp) protein (489aa)
peptidase S41 n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C382
Uncharacterized protein {ECO:0000313|EMBL:AHN97775.1}; TaxID=1447247 species="Bacteria; environmental samples.;" source="uncultured bacterium lac82.;"
peptidase S41
SCN18_25_8_15_R2_B_scaffold_208_5
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4195..4485
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003085ADB
Uncharacterized protein {ECO:0000313|EMBL:ESW88842.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_208_6
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4482..4631
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F734_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO31770.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCN18_25_8_15_R2_B_scaffold_208_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4634..5425)
DNA (792bp) protein (264aa)
Putative extradiol dioxygenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7B0_9SPHN
LigB family dioxygenase {ECO:0000313|EMBL:AKH44059.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
extradiol ring-cleavage dioxygenase III subunit B
SCN18_25_8_15_R2_B_scaffold_208_8
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5464..5907)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VST3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU10491.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_208_9
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5979..6446
DNA (468bp) protein (156aa)
SCN18_25_8_15_R2_B_scaffold_208_10
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6547..8766
DNA (2220bp) protein (740aa)
Sensor histidine kinase YycG {ECO:0000313|EMBL:AKH41612.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AKH41612.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Nitrogen regulation protein NtrY n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBR5_9SPHN
periplasmic sensor signal transduction histidine kinase
SCN18_25_8_15_R2_B_scaffold_208_11
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8798..10180
DNA (1383bp) protein (461aa)
Two-component response regulator n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NAE6_ERYLH
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:AKH41611.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
two-component response regulator
SCN18_25_8_15_R2_B_scaffold_208_12
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10333..10899
DNA (567bp) protein (189aa)
Host factor-I protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CAA0_9SPHN
RNA-binding protein Hfq {ECO:0000313|EMBL:AKH41610.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
RNA-binding protein
SCN18_25_8_15_R2_B_scaffold_208_13
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11043..12230
DNA (1188bp) protein (396aa)
GTPase HflX n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A003_9SPHN
GTPase HflX {ECO:0000313|EMBL:AKH41609.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
GTPase
SCN18_25_8_15_R2_B_scaffold_208_14
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12240..12998)
DNA (759bp) protein (253aa)
nucleotide pyrophosphohydrolase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EA18
MazG family protein
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
SCN18_25_8_15_R2_B_scaffold_208_15
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13050..13220)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH41607.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
SCN18_25_8_15_R2_B_scaffold_208_16
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13217..13972)
DNA (756bp) protein (252aa)
Putative hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBS3_9SPHN
Putative hydrolase {ECO:0000313|EMBL:AKH41606.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
beta-lactamase
SCN18_25_8_15_R2_B_scaffold_208_17
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13981..14757)
DNA (777bp) protein (259aa)
Putative deoxyribonuclease YcfH {ECO:0000313|EMBL:AKH41605.1}; EC=3.1.21.- {ECO:0000313|EMBL:AKH41605.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Hydrolase, TatD family n=1 Tax=Novosphingobium sp. AP12 RepID=J3A5L7_9SPHN
LuxR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_208_18
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14757..16331)
DNA (1575bp) protein (525aa)
Methionine--tRNA ligase {ECO:0000313|EMBL:AKH41604.1}; EC=6.1.1.10 {ECO:0000313|EMBL:AKH41604.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DDD1EF
SCN18_25_8_15_R2_B_scaffold_208_19
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16324..17286)
DNA (963bp) protein (321aa)
DNA polymerase III subunit tau {ECO:0000313|EMBL:AKH41603.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AKH41603.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
DNA polymerase III subunit delta n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A011_9SPHN
DNA polymerase III subunit delta'
SCN18_25_8_15_R2_B_scaffold_208_20
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17283..17921)
DNA (639bp) protein (213aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
Thymidylate kinase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ07_9SPHN
thymidylate kinase
SCN18_25_8_15_R2_B_scaffold_208_21
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17918..19087)
DNA (1170bp) protein (390aa)
D-alanyl-D-alanine carboxypeptidase DacD {ECO:0000313|EMBL:AKH41601.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AKH41601.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NAF7_ERYLH
D-alanyl-D-alanine carboxypeptidase
SCN18_25_8_15_R2_B_scaffold_208_22
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19316..20338)
DNA (1023bp) protein (341aa)
Lytic murein transglycosylase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P7K5_9SPHN
Lytic transglycosylase {ECO:0000313|EMBL:KHL25898.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
lytic murein transglycosylase
SCN18_25_8_15_R2_B_scaffold_208_23
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20418..21344)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Togninia minima (strain UCR-PA7) RepID=R8BPM6_TOGMI
Uncharacterized protein {ECO:0000313|EMBL:AKH41598.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_208_trna_1
unknown

Not on your lists

21490..21576
DNA (87bp)
transferRNA Ser
SCN18_25_8_15_R2_B_scaffold_208_24
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21619..21906)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5V8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KHJ55704.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_208_25
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22310..22492)
DNA (183bp) protein (61aa)
SCN18_25_8_15_R2_B_scaffold_208_26
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22570..23979)
DNA (1410bp) protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:AKH41595.1}; EC=1.8.1.4 {ECO:0000313|EMBL:AKH41595.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A5K5_9SPHN
pyruvate dehydrogenase complex, E3 component, lipoamidedehydrogenase
SCN18_25_8_15_R2_B_scaffold_208_27
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23958..24290)
DNA (333bp) protein (111aa)
SCN18_25_8_15_R2_B_scaffold_208_28
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24290..24661)
DNA (372bp) protein (124aa)
Acyl-CoA hydrolase n=1 Tax=Novosphingobium sp. AP12 RepID=J3ALG8_9SPHN
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:KHK91481.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
acyl-CoA thioester hydrolase
SCN18_25_8_15_R2_B_scaffold_208_29
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24912..26192)
DNA (1281bp) protein (427aa)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000313|EMBL:AKH41592.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AKH41592.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
dihydrolipoamide acetyltransferase, long form (EC:2.3.1.61)
Dihydrolipoamide acetyltransferase, long form n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6Y7_NOVAD
Displaying items 1-30 of 205 in total

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