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SCN18_25_8_15_R2_B_scaffold_325

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Displaying items 1-30 of 110 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_325_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212..1588)
DNA (1377bp) protein (459aa)
Putative aromatic acid transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISD4_9SPHN
4-hydroxybenzoate transporter PcaK {ECO:0000313|EMBL:AKH41108.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
putative aromatic acid transporter
SCN18_25_8_15_R2_B_scaffold_325_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1958..2437
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IY85_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42949.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_3
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2524..3468)
DNA (945bp) protein (315aa)
Putative oxidoreductase SadH {ECO:0000313|EMBL:AKH41106.1}; EC=1.-.-.- {ECO:0000313|EMBL:AKH41106.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV7_9SPHN
putative oxidoreductase
SCN18_25_8_15_R2_B_scaffold_325_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3480..4349)
DNA (870bp) protein (290aa)
Sorbitol dehydrogenase {ECO:0000313|EMBL:AKH41105.1}; EC=1.1.1.14 {ECO:0000313|EMBL:AKH41105.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G758_NOVAD
short-chain dehydrogenase/reductase SDR
SCN18_25_8_15_R2_B_scaffold_325_5
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4415..6499)
DNA (2085bp) protein (695aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I8G9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07975.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
TonB-dependent receptor
SCN18_25_8_15_R2_B_scaffold_325_6
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6608..7105
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IL59_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65122.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_25_8_15_R2_B_scaffold_325_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7202..9532)
DNA (2331bp) protein (777aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:AKH41103.1}; EC=2.7.7.8 {ECO:0000313|EMBL:AKH41103.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKV5_9SPHN
SCN18_25_8_15_R2_B_scaffold_325_8
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9786..10055)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y480_9SPHN
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
30S ribosomal protein S15
SCN18_25_8_15_R2_B_scaffold_325_9
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10061..10990)
DNA (930bp) protein (310aa)
tRNA pseudouridine synthase B {ECO:0000313|EMBL:AKH41101.1}; EC=5.4.99.25 {ECO:0000313|EMBL:AKH41101.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI43_9SPHN
SCN18_25_8_15_R2_B_scaffold_325_10
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10987..11487)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZB4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47838.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_11
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11530..12264)
DNA (735bp) protein (245aa)
Peptidase M50 family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ9_9SPHN
Peptidase family M50 {ECO:0000313|EMBL:AKH41100.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
peptidase M48
SCN18_25_8_15_R2_B_scaffold_325_12
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12288..12683)
DNA (396bp) protein (132aa)
Ribosome-binding factor A n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y484_9SPHN
Ribosome-binding factor A {ECO:0000313|EMBL:AKH41097.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ribosome-binding factor A
SCN18_25_8_15_R2_B_scaffold_325_13
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13114..15657)
DNA (2544bp) protein (848aa)
translation initiation factor IF-2 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003110769
Translation initiation factor IF-2 {ECO:0000313|EMBL:AKH41095.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
translation initiation factor IF-2
SCN18_25_8_15_R2_B_scaffold_325_14
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15708..16409)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZB7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41094.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_15
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16390..18051)
DNA (1662bp) protein (554aa)
N-utilization substance protein A n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC12_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:AKH41093.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
nusA; transcription elongation factor NusA
SCN18_25_8_15_R2_B_scaffold_325_16
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18051..18611)
DNA (561bp) protein (187aa)
Ribosome maturation factor RimP n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI02_9SPHN
Ribosome maturation factor RimP {ECO:0000313|EMBL:AKH41092.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_17
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18833..19342
DNA (510bp) protein (170aa)
SCN18_25_8_15_R2_B_scaffold_325_18
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19359..20378)
DNA (1020bp) protein (340aa)
DNA-binding protein Fis n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G974_NOVAD
Psp operon transcriptional activator {ECO:0000313|EMBL:AKH41091.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Fis family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_325_19
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20405..20689
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH41090.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
SCN18_25_8_15_R2_B_scaffold_325_20
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20686..21546
DNA (861bp) protein (287aa)
Sigma54-dependent transcription suppressor n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC20_ERYLH
Phage shock protein A {ECO:0000313|EMBL:AKH41089.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
sigma54-dependent transcription suppressor
SCN18_25_8_15_R2_B_scaffold_325_21
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21550..21843
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G971_NOVAD
Phage shock protein B {ECO:0000313|EMBL:AKH41088.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_22
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21840..22214
DNA (375bp) protein (125aa)
Putative stress-responsive transcriptional regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI19_9SPHN
DNA-binding transcriptional activator PspC {ECO:0000313|EMBL:AKH44291.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
phage shock protein C, PspC
SCN18_25_8_15_R2_B_scaffold_325_23
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22237..22539
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB77_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL48825.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_24
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22536..22844
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI17_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54808.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_25
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22844..23197
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003172ACA
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
SCN18_25_8_15_R2_B_scaffold_325_26
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23194..23451
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC29_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC62762.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
SCN18_25_8_15_R2_B_scaffold_325_27
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23479..23715
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC30_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:AKH41081.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_325_28
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23875..24282
DNA (408bp) protein (136aa)
Fe-S center assembly protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI08_9SPHN
Sulfur acceptor protein CsdE {ECO:0000313|EMBL:AKH44284.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Fe-S center assembly protein
SCN18_25_8_15_R2_B_scaffold_325_29
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24352..25782
DNA (1431bp) protein (477aa)
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:AKH44281.1}; EC=4.2.1.33 {ECO:0000313|EMBL:AKH44281.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZC1_9SPHN
isopropylmalate isomerase large subunit
SCN18_25_8_15_R2_B_scaffold_325_30
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26116..26445)
DNA (330bp) protein (110aa)
Glutaredoxin n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB60_9SPHN
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
glutaredoxin-like protein
Displaying items 1-30 of 110 in total

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