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SCN18_25_8_15_R2_B_scaffold_532

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_532_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)
SCN18_25_8_15_R2_B_scaffold_532_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19..588)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0I2R4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EPR14786.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_532_3
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

914..1102
DNA (189bp) protein (63aa)
UPI0003CFF006 related cluster n=1 Tax=unknown RepID=UPI0003CFF006
Uncharacterized protein {ECO:0000313|EMBL:KEO88928.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
SCN18_25_8_15_R2_B_scaffold_532_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1099..1482
DNA (384bp) protein (128aa)
UPI0003CFC57F related cluster n=1 Tax=unknown RepID=UPI0003CFC57F
Uncharacterized protein {ECO:0000313|EMBL:KEO88927.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_532_5
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1513..2280)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E2630B
Uncharacterized protein {ECO:0000313|EMBL:KEO88926.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
restriction endonuclease
SCN18_25_8_15_R2_B_scaffold_532_6
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2578..2802
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D3C103
Uncharacterized protein {ECO:0000313|EMBL:KEO88925.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_532_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2818..4146)
DNA (1329bp) protein (443aa)
HipA-like phosphatidylinositol 3/4-kinase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPQ1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO88923.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
HipA domain-containing protein
SCN18_25_8_15_R2_B_scaffold_532_8
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4146..4658)
DNA (513bp) protein (171aa)
MerR family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8W310_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO88922.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
transcriptional regulator, y4mf family
SCN18_25_8_15_R2_B_scaffold_532_9
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4840..6030)
DNA (1191bp) protein (397aa)
Integrase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2T5V3_9PROT
Integrase {ECO:0000313|EMBL:EMD81844.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
symbiosis island integrase
SCN18_25_8_15_R2_B_scaffold_532_trna_2
unknown

Not on your lists

comp(6211..6294)
DNA (84bp)
transferRNA Leu
SCN18_25_8_15_R2_B_scaffold_532_10
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6472..6966
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT1_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCN18_25_8_15_R2_B_scaffold_532_11
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6985..8313)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003132D03
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KDB07234.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
major facilitator superfamily protein
SCN18_25_8_15_R2_B_scaffold_532_12
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8458..9384)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F62A46
helix-turn-helix domain-containing protein
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:AFU47167.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_25_8_15_R2_B_scaffold_532_13
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9595..11067
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036C87EC
Aldehyde dehydrogenase (NAD+) {ECO:0000313|EMBL:EBA07797.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
NAD-dependent aldehyde dehydrogenase
SCN18_25_8_15_R2_B_scaffold_532_14
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11069..11500
DNA (432bp) protein (144aa)
SCN18_25_8_15_R2_B_scaffold_532_15
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11502..11954
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003678893
Uncharacterized protein {ECO:0000313|EMBL:AKH42236.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_532_16
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11962..13566
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E386DB
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EHJ61444.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCN18_25_8_15_R2_B_scaffold_532_17
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13581..14357)
DNA (777bp) protein (259aa)
Glutathione S-transferase {ECO:0000313|EMBL:BAK65398.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAK65398.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glutathione S-transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IME3_9SPHN
glutathione S-transferase
SCN18_25_8_15_R2_B_scaffold_532_18
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14350..15198)
DNA (849bp) protein (283aa)
2-(R)-hydroxypropyl-CoM dehydrogenase {ECO:0000313|EMBL:AKH42880.1}; EC=1.1.1.268 {ECO:0000313|EMBL:AKH42880.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IME4_9SPHN
putative oxidoreductase
SCN18_25_8_15_R2_B_scaffold_532_19
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15259..16587)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037E26D6
Uncharacterized protein {ECO:0000313|EMBL:EPD63996.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
glycine cleavage T protein (aminomethyl transferase)
SCN18_25_8_15_R2_B_scaffold_532_20
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16723..17697
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GG17_9SPHN
AraC family transcriptional regulator {ECO:0000313|EMBL:EZP71396.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
transcriptional regulator, AraC family
SCN18_25_8_15_R2_B_scaffold_532_21
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17873..20341
DNA (2469bp) protein (823aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY7_9SPHN
Ferripyoverdine receptor {ECO:0000313|EMBL:AKH42882.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TonB-dependent receptor-like protein
SCN18_25_8_15_R2_B_scaffold_532_22
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20370..21278
DNA (909bp) protein (303aa)
Biphenyl-2,3-diol 1,2-dioxygenase {ECO:0000313|EMBL:AKH42883.1}; EC=1.13.11.39 {ECO:0000313|EMBL:AKH42883.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Glyoxalase-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKY6_9SPHN
glyoxalase-family protein
SCN18_25_8_15_R2_B_scaffold_532_23
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21306..22424
DNA (1119bp) protein (373aa)
FAD-dependent urate hydroxylase {ECO:0000313|EMBL:AKH42884.1}; EC=1.14.13.113 {ECO:0000313|EMBL:AKH42884.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II00_9SPHN
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_532_24
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22433..23395
DNA (963bp) protein (321aa)
Ureidoglycolate lyase {ECO:0000313|EMBL:AKH42885.1}; EC=4.3.2.3 {ECO:0000313|EMBL:AKH42885.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II01_9SPHN
SCN18_25_8_15_R2_B_scaffold_532_25
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23392..24054)
DNA (663bp) protein (221aa)
TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II02_9SPHN
Transcriptional regulator BetI {ECO:0000313|EMBL:AKH42886.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
TetR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_532_26
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24166..25149
DNA (984bp) protein (328aa)
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:AKH42887.1}; EC=3.1.2.6 {ECO:0000313|EMBL:AKH42887.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Beta-lactamase domain-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II03_9SPHN
beta-lactamase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_532_27
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25139..26428
DNA (1290bp) protein (430aa)
Fumarylacetoacetate hydrolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB72_9SPHN
Fumarylacetoacetate (FAA) hydrolase family protein {ECO:0000313|EMBL:AKH42888.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
fumarylacetoacetase
SCN18_25_8_15_R2_B_scaffold_532_28
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26425..27480
DNA (1056bp) protein (352aa)
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
Aminocarboxymuconate-semialdehyde decarboxylase {ECO:0000313|EMBL:CCA94036.1}; EC=4.1.1.45 {ECO:0000313|EMBL:CCA94036.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II05_9SPHN
SCN18_25_8_15_R2_B_scaffold_532_29
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27587..28882
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB70_9SPHN
L-galactonate transporter {ECO:0000313|EMBL:AKH42890.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
MFS transporter
Displaying items 1-30 of 61 in total

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