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SCN18_25_8_15_R2_B_scaffold_1436

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1436_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2833
DNA (2832bp) protein (944aa)
Chromosome partition protein Smc n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZW4_9SPHN
Chromosome partition protein Smc {ECO:0000313|EMBL:AKH42288.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
chromosome segregation protein
SCN18_25_8_15_R2_B_scaffold_1436_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2955..3293)
DNA (339bp) protein (113aa)
Conserved repeat protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYA4_9SPHN
conserved repeat protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67500.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_25_8_15_R2_B_scaffold_1436_3
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3311..3676)
DNA (366bp) protein (122aa)
SCN18_25_8_15_R2_B_scaffold_1436_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3953..4252)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHK6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47635.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1436_5
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4252..5622)
DNA (1371bp) protein (457aa)
Glutamate--cysteine ligase GshA {ECO:0000313|EMBL:AKH42292.1}; EC=6.3.2.2 {ECO:0000313|EMBL:AKH42292.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Glutamate-cysteine ligase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCB6_ERYLH
glutamate--cysteine ligase
SCN18_25_8_15_R2_B_scaffold_1436_6
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5662..6426)
DNA (765bp) protein (255aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ4_9SPHN
16S rRNA methyltransferase
SCN18_25_8_15_R2_B_scaffold_1436_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6551..7456
DNA (906bp) protein (302aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:AKH42294.1}; EC=2.5.1.- {ECO:0000313|EMBL:AKH42294.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative 4-hydroxybenzoate octaprenyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3P2_9SPHN
ubiA; 4-hydroxybenzoate polyprenyltransferase
SCN18_25_8_15_R2_B_scaffold_1436_8
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7453..8817)
DNA (1365bp) protein (455aa)
Outer membrane protein assembly factor BamB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHZ8_9SPHN
Outer membrane protein assembly factor BamB {ECO:0000313|EMBL:AKH42296.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1436_9
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8814..9605)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYN5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42297.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1436_10
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9710..10846)
DNA (1137bp) protein (379aa)
Putative glycosyltransferase EpsF {ECO:0000313|EMBL:AKH42298.1}; EC=2.4.-.- {ECO:0000313|EMBL:AKH42298.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Glycosyl transferase group 1 n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCC2_ERYLH
glycosyl transferase family 1
SCN18_25_8_15_R2_B_scaffold_1436_11
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10843..11706)
DNA (864bp) protein (288aa)
Putative hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHL0_9SPHN
Alpha/beta hydrolase {ECO:0000313|EMBL:KHL26852.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
alpha/beta hydrolase
SCN18_25_8_15_R2_B_scaffold_1436_12
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11779..13182
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCC4_ERYLH
Selenoprotein O {ECO:0000313|EMBL:KHL26410.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1436_13
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13247..14662
DNA (1416bp) protein (472aa)
N-succinylglutamate 5-semialdehyde dehydrogenase {ECO:0000313|EMBL:AKH42301.1}; EC=1.2.1.71 {ECO:0000313|EMBL:AKH42301.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
astD; succinylglutamic semialdehyde dehydrogenase (EC:1.2.1.-)
N-succinylglutamate 5-semialdehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ASTD_NOVAD
SCN18_25_8_15_R2_B_scaffold_1436_14
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14878..15294)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WF65_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42303.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
17 kDa surface antigen
SCN18_25_8_15_R2_B_scaffold_1436_15
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15435..16331
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDV5_9SPHN
EamA-like transporter family protein {ECO:0000313|EMBL:AKH42304.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
rarD protein
SCN18_25_8_15_R2_B_scaffold_1436_16
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16285..17334)
DNA (1050bp) protein (350aa)
Dihydroorotase {ECO:0000313|EMBL:AKH42305.1}; EC=3.5.2.3 {ECO:0000313|EMBL:AKH42305.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
dihydroorotase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B57417
dihydroorotase
SCN18_25_8_15_R2_B_scaffold_1436_17
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17687..18421
DNA (735bp) protein (245aa)
aminomethyltransferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4FAF3
Putative global regulator {ECO:0000313|EMBL:AKH42307.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
aminomethyltransferase
SCN18_25_8_15_R2_B_scaffold_1436_18
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18471..19112
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G8G4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA96931.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1436_19
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19116..19664)
DNA (549bp) protein (183aa)
GCN5-related N-acetyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9U7_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHL26417.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
GCN5-like N-acetyltransferase
SCN18_25_8_15_R2_B_scaffold_1436_20
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19837..20106)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L3H2_9SPHN
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
rpmA; 50S ribosomal protein L27
SCN18_25_8_15_R2_B_scaffold_1436_21
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20120..20662)
DNA (543bp) protein (181aa)
50S ribosomal protein L21 n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DFE1
50S ribosomal protein L21 {ECO:0000313|EMBL:AKH42311.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
rplU; 50S ribosomal protein L21
SCN18_25_8_15_R2_B_scaffold_1436_22
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20859..21353
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PBR6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42312.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Conserved Putative secreted protein
SCN18_25_8_15_R2_B_scaffold_1436_23
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21469..21936)
DNA (468bp) protein (156aa)
molybdopterin converting factor n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DFDD
Molybdopterin converting factor {ECO:0000313|EMBL:KHL26421.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
molybdopterin converting factor subunit 2
SCN18_25_8_15_R2_B_scaffold_1436_24
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21938..22180)
DNA (243bp) protein (81aa)
Molybdopterin synthase sulfur carrier subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3R4_9SPHN
ThiS family protein {ECO:0000313|EMBL:AKH42314.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
Displaying 24 items

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