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SCN18_25_8_15_R2_B_scaffold_1566

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1566_1
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..156
DNA (156bp) protein (52aa)
Peptidoglycan-associated protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N609_ERYLH
Flagellar motor protein MotB {ECO:0000313|EMBL:KEO86625.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
peptidoglycan-associated protein
SCN18_25_8_15_R2_B_scaffold_1566_2
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(637..837)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6INR0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ62870.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCN18_25_8_15_R2_B_scaffold_1566_3
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(869..4336)
DNA (3468bp) protein (1156aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
DNA polymerase III subunit alpha n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRL5_9SPHN
DNA polymerase III subunit alpha
SCN18_25_8_15_R2_B_scaffold_1566_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4441..5115)
DNA (675bp) protein (225aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000313|EMBL:AKH41743.1}; EC=3.6.3.- {ECO:0000313|EMBL:AKH41743.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Novosphingobium sp. AP12 RepID=J2G2I6_9SPHN
ABC transporter-like protein
SCN18_25_8_15_R2_B_scaffold_1566_5
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5108..6394)
DNA (1287bp) protein (429aa)
Lipoprotein-releasing system permease protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGW2_9SPHN
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHL25795.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
lipoprotein-releasing system permease
SCN18_25_8_15_R2_B_scaffold_1566_6
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6467..7888
DNA (1422bp) protein (474aa)
Putative cytochrome bd-I oxidase subunit I {ECO:0000313|EMBL:BAK67519.1}; EC=1.10.3.- {ECO:0000313|EMBL:BAK67519.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative cytochrome bd-I oxidase subunit I n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKW7_9SPHN
cydA; putative cytochrome bd-I oxidase subunit I
SCN18_25_8_15_R2_B_scaffold_1566_7
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7885..8886
DNA (1002bp) protein (334aa)
Cytochrome bd-I oxidase subunit II {ECO:0000313|EMBL:BAK67518.1}; EC=1.10.3.- {ECO:0000313|EMBL:BAK67518.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Cytochrome bd-I oxidase subunit II n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKW6_9SPHN
cydB; cytochrome bd-I oxidase subunit II
SCN18_25_8_15_R2_B_scaffold_1566_8
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8996..10009)
DNA (1014bp) protein (338aa)
inorganic phosphate transporter n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000380393C
Inorganic phosphate transporter {ECO:0000313|EMBL:AHE51837.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
phosphate transporter
SCN18_25_8_15_R2_B_scaffold_1566_9
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10021..11082)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003781026
Uncharacterized protein {ECO:0000313|EMBL:AHE51836.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
phosphate transport regulator
SCN18_25_8_15_R2_B_scaffold_1566_10
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11295..12650)
DNA (1356bp) protein (452aa)
Aldehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITK5_9SPHN
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_25_8_15_R2_B_scaffold_1566_11
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13021..13431
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7N6_NOVAD
Low affinity iron permease {ECO:0000313|EMBL:KHS46740.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1566_12
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13561..15627)
DNA (2067bp) protein (689aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AKH41745.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AKH41745.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHI1_9SPHN
SCN18_25_8_15_R2_B_scaffold_1566_13
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15763..16275
DNA (513bp) protein (171aa)
Hemerythrin n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HIY3_9SPHN
Hemerythrin {ECO:0000313|EMBL:EQA99294.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hemerythrin HHE cation binding domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1566_14
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16332..16595
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000302A715
Uncharacterized protein {ECO:0000313|EMBL:KHL25793.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1566_15
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16818..20126
DNA (3309bp) protein (1103aa)
Transcription-repair-coupling factor {ECO:0000313|EMBL:AKH41747.1}; EC=3.6.4.- {ECO:0000313|EMBL:AKH41747.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
transcription-repair coupling factor n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0FED
transcription-repair coupling factor
Displaying 15 items

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