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SCN18_25_8_15_R2_B_scaffold_572

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_572_1
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..947)
DNA (945bp) protein (315aa)
Major facilitator superfamily MFS_1 n=2 Tax=Alicycliphilus denitrificans RepID=E8TXM4_ALIDB
major facilitator superfamily protein
Major facilitator transporter {ECO:0000313|EMBL:GAO24370.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_572_2
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1125..1931)
DNA (807bp) protein (269aa)
LytTr DNA-binding region protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXM3_ALIDB
lyttr DNA-binding region protein
Lyttr DNA-binding region protein {ECO:0000313|EMBL:GAO24369.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_572_3
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1900..2955)
DNA (1056bp) protein (352aa)
Histidine kinase internal region protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXM2_ALIDB
histidine kinase internal region protein
Histidine kinase internal region protein {ECO:0000313|EMBL:GAO24368.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_572_4
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2965..3321)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXM1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00789.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_572_5
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3333..3884)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXM0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24366.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_572_6
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4071..4895
DNA (825bp) protein (275aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Undecaprenyl-diphosphatase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXL9_ALIDB
undecaprenol kinase
SCN18_25_8_15_R2_B_scaffold_572_7
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4911..5723)
DNA (813bp) protein (271aa)
Alpha/beta hydrolase fold protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXL8_ALIDB
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADV00786.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_572_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5837..7261
DNA (1425bp) protein (475aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXL7_ALIDB
efflux transporter, rnd family, mfp subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00785.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_572_9
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7298..10414
DNA (3117bp) protein (1039aa)
Acriflavin resistance protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXL6_ALIDB
Acriflavin resistance protein {ECO:0000313|EMBL:ADV00784.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
acriflavin resistance protein
SCN18_25_8_15_R2_B_scaffold_572_10
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10871..14002
DNA (3132bp) protein (1044aa)
Acriflavin resistance protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDX3_ALIDK
Acriflavin resistance protein {ECO:0000313|EMBL:AEB83790.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
acriflavin resistance protein
SCN18_25_8_15_R2_B_scaffold_572_11
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13999..15411
DNA (1413bp) protein (471aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXL4_ALIDB
Outer membrane lipoprotein {ECO:0000313|EMBL:GAO21933.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
rnd efflux system, outer membrane lipoprotein, nodt family
SCN18_25_8_15_R2_B_scaffold_572_12
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15424..18003)
DNA (2580bp) protein (860aa)
DNA mismatch repair protein MutS n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDX5_ALIDK
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
DNA mismatch repair protein mutS
SCN18_25_8_15_R2_B_scaffold_572_13
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18050..19309)
DNA (1260bp) protein (420aa)
integrase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003044C09
integrase family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCN18_25_8_15_R2_B_scaffold_572_14
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19804..19989)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVQ9_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37719.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCN18_25_8_15_R2_B_scaffold_572_15
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20553..21764
DNA (1212bp) protein (404aa)
Helix-turn-helix domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8N9_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:KHS13970.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
helix-turn-helix domain-containing protein
SCN18_25_8_15_R2_B_scaffold_572_16
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21761..22834
DNA (1074bp) protein (358aa)
UPI0003A5F5E9 related cluster n=1 Tax=unknown RepID=UPI0003A5F5E9
Uncharacterized protein {ECO:0000313|EMBL:KHS13969.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_572_17
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23676..25133)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM49 RepID=J2TK55_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KJZ46086.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
SCN18_25_8_15_R2_B_scaffold_572_18
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25130..27439)
DNA (2310bp) protein (770aa)
UPI0003CF9E79 related cluster n=1 Tax=unknown RepID=UPI0003CF9E79
Uncharacterized protein {ECO:0000313|EMBL:ESZ26590.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
Nephrocystin-3
SCN18_25_8_15_R2_B_scaffold_572_19
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27454..28185)
DNA (732bp) protein (244aa)
UPI0003D0058E related cluster n=1 Tax=unknown RepID=UPI0003D0058E
Uncharacterized protein {ECO:0000313|EMBL:ESZ26591.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
SCN18_25_8_15_R2_B_scaffold_572_20
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29516..30538)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFE5_BURGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA61111.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
SCN18_25_8_15_R2_B_scaffold_572_21
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30531..31127)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K4QML3_BORBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCN21167.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCN18_25_8_15_R2_B_scaffold_572_22
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31149..31259)
DNA (111bp) protein (37aa)
SCN18_25_8_15_R2_B_scaffold_572_23
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32041..33027)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXL0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83796.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_572_24
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33066..34262)
DNA (1197bp) protein (399aa)
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEB83797.1}; EC=1.1.2.3 {ECO:0000313|EMBL:AEB83797.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
L-lactate dehydrogenase (Cytochrome) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEJ5_ALIDK
SCN18_25_8_15_R2_B_scaffold_572_25
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34375..35289
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEJ6_ALIDK
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB83798.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_572_26
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35308..36891)
DNA (1584bp) protein (528aa)
Alkaline phosphatase {ECO:0000313|EMBL:ADV00775.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ADV00775.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXK7_ALIDB
SCN18_25_8_15_R2_B_scaffold_572_27
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36918..38498)
DNA (1581bp) protein (527aa)
Diguanylate cyclase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXK6_ALIDB
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:GAO24281.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCN18_25_8_15_R2_B_scaffold_572_28
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38564..39385
DNA (822bp) protein (274aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
5'-nucleotidase SurE n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK5_ALIDB
stationary-phase survival protein sure
SCN18_25_8_15_R2_B_scaffold_572_29
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39385..40161
DNA (777bp) protein (259aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:AEB83802.1}; EC=2.1.1.77 {ECO:0000313|EMBL:AEB83802.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Protein-L-isoaspartate O-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK4_ALIDB
SCN18_25_8_15_R2_B_scaffold_572_30
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40173..41075
DNA (903bp) protein (301aa)
Peptidase M23 n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK3_ALIDB
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AEB83803.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying items 1-30 of 50 in total

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