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SCN18_25_8_15_R2_B_scaffold_3505

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3505_1
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2..577
DNA (576bp) protein (192aa)
endonuclease n=1 Tax=Comamonas sp. B-9 RepID=UPI000395D167
Phage-type endonuclease {ECO:0000313|EMBL:EED68376.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3505_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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639..938
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X1T5_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED68378.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3505_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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941..1345
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUZ4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99403.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_3505_4
scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, Phage

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1376..1831
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUZ2_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99401.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_3505_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1818..2300
DNA (483bp) protein (161aa)
Putative endonuclease n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHT4_9SPHN
putative endonuclease
Tax=BJP_IG2158_Planctomycetes_45_10
SCN18_25_8_15_R2_B_scaffold_3505_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2293..2529
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQU5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45413.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_25_8_15_R2_B_scaffold_3505_7
scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, scnpilot_dereplicated_Phage_Delftia_1, Phage

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2540..3397
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUZ0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99399.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_3505_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3390..3608
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUY9_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99398.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_3505_9
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3705..4202
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L488_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED41175.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
phage methyltransferase
SCN18_25_8_15_R2_B_scaffold_3505_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4231..5550
DNA (1320bp) protein (440aa)
Cytosine-specific methyltransferase n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1H0X3_CITFR
Cytosine-specific DNA methyltransferase {ECO:0000313|EMBL:EGH59145.1}; TaxID=629265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. maculicola str. ES4326.;"
site-specific DNA methylase
SCN18_25_8_15_R2_B_scaffold_3505_11

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comp(5420..6061)
DNA (642bp) protein (214aa)
HNH endonuclease n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VKG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKL07948.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HNH endonuclease
SCN18_25_8_15_R2_B_scaffold_3505_12
Acinetobacter schindleri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6393..6764
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Acinetobacter schindleri NIPH 900 RepID=N8Y5V7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV14705.1}; TaxID=1217675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter schindleri NIPH 900.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3505_13
unknown

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6761..7006
DNA (246bp) protein (82aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_3505_14
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7369..8382
DNA (1014bp) protein (338aa)
Integrase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUY7_ALIDB
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADU99396.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCN18_25_8_15_R2_B_scaffold_3505_trna_1
unknown

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comp(8411..8483)
DNA (73bp)
transferRNA Lys
SCN18_25_8_15_R2_B_scaffold_3505_15
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8530..8808)
DNA (279bp) protein (93aa)
UBA/THIF-type NAD/FAD binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUY6_ALIDB
uba/thif-type nad/fad binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:AEB85520.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 16 items

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