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SCN18_25_8_15_R2_B_scaffold_1202

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1202_1
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141..581)
DNA (441bp) protein (147aa)
ISStmaD2 Transposase B n=2 Tax=Proteobacteria RepID=I0KI76_STEMA
transposase, IS4 family protein
Transposase, IS4 family {ECO:0000313|EMBL:ABI60707.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
SCN18_25_8_15_R2_B_scaffold_1202_2
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(673..915)
DNA (243bp) protein (81aa)
isocitrate lyase (EC:4.1.3.1)
isocitrate lyase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003657170
Isocitrate lyase {ECO:0000313|EMBL:GAD24117.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCN18_25_8_15_R2_B_scaffold_1202_3
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1134..2318)
DNA (1185bp) protein (395aa)
integrase n=1 Tax=Acidovorax radicis RepID=UPI00023765E1
Integrase {ECO:0000313|EMBL:KJA10097.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
integrase family protein
SCN18_25_8_15_R2_B_scaffold_1202_4
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

comp(2671..3897)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00036CD544
Uncharacterized protein {ECO:0000313|EMBL:KGH03194.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1202_5
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4660..4812)
DNA (153bp) protein (51aa)
SCN18_25_8_15_R2_B_scaffold_1202_6
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4837..5016)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037470DA
Uncharacterized protein {ECO:0000313|EMBL:KEH07053.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCN18_25_8_15_R2_B_scaffold_1202_7
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5013..5480)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E655D0
Uncharacterized protein {ECO:0000313|EMBL:KEH07052.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCN18_25_8_15_R2_B_scaffold_1202_8
unknown

Not on your lists

comp(5477..5653)
DNA (177bp) protein (59aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1202_9
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5650..6018)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00035DA4C6
Uncharacterized protein {ECO:0000313|EMBL:KEH07051.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCN18_25_8_15_R2_B_scaffold_1202_10
unknown

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comp(6132..6512)
DNA (381bp) protein (127aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1202_11
unknown

Not on your lists

comp(6566..6991)
DNA (426bp) protein (142aa)

This feature has no annotations

SCN18_25_8_15_R2_B_scaffold_1202_12
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7048..7644)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037D5648
Uncharacterized protein {ECO:0000313|EMBL:KEH07049.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCN18_25_8_15_R2_B_scaffold_1202_13
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7646..8029)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037723A0
Uncharacterized protein {ECO:0000313|EMBL:KEH07048.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1202_14
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8277..8561
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000360560F
Transcriptional regulator {ECO:0000313|EMBL:KEH07047.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1202_15
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8839..9120
DNA (282bp) protein (94aa)
XRE family transcriptional regulator n=1 Tax=Comamonas sp. B-9 RepID=UPI0003954E12
Uncharacterized protein {ECO:0000313|EMBL:KGH03253.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
XRE family transcriptional regulator (fragment)
SCN18_25_8_15_R2_B_scaffold_1202_16
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9192..9932)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. pectinolytica 34mel RepID=T0PEB4_AERSA
Uncharacterized protein {ECO:0000313|EMBL:EQC02372.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. pectinolytica 34mel.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1202_17
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10358..11689)
DNA (1332bp) protein (444aa)
Isocitrate lyase {ECO:0000313|EMBL:AEB85180.1}; EC=4.1.3.1 {ECO:0000313|EMBL:AEB85180.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Isocitrate lyase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRN5_ALIDB
isocitrate lyase
SCN18_25_8_15_R2_B_scaffold_1202_18
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11989..12975
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRN6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85181.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1202_19
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13132..13413
DNA (282bp) protein (94aa)
SWIB/MDM2 domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRN7_ALIDB
SWIB/MDM2 domain-containing protein
SWIB/MDM2 domain-containing protein {ECO:0000313|EMBL:AEB85182.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_25_8_15_R2_B_scaffold_1202_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13664..14872
DNA (1209bp) protein (403aa)
Putative prophage integrase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTI6_STRMK
Integrase {ECO:0000313|EMBL:KIL06288.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
prophage integrase
SCN18_25_8_15_R2_B_scaffold_1202_21
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14911..15270
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKX9_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP42508.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_25_8_15_R2_B_scaffold_1202_22
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15274..15594
DNA (321bp) protein (107aa)
Putative DNA-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKY1_BORPD
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:CAP42509.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_25_8_15_R2_B_scaffold_1202_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15629..16609
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKY4_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP42510.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_25_8_15_R2_B_scaffold_1202_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16578..16826
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKY6_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP42511.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCN18_25_8_15_R2_B_scaffold_1202_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16813..18609
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKY7_BORPD
Uncharacterized protein {ECO:0000313|EMBL:CAP42512.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1202_26
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19074..19466
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6DDJ3_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EXI88134.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1202_27
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19599..19829)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003762547
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08359.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCN18_25_8_15_R2_B_scaffold_1202_28
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20240..21067
DNA (828bp) protein (276aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=U8TT76_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AKC05741.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1202_29
CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, Mobile_element

Not on your lists

21133..23202
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MC05_PSEAI
ParB-like protein {ECO:0000313|EMBL:KDD60161.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
ParB domain protein nuclease
SCN18_25_8_15_R2_B_scaffold_1202_30
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23433..24353)
DNA (921bp) protein (307aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ45929.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
Displaying items 1-30 of 33 in total

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