ggKbase home page

SCN18_25_8_15_R2_B_scaffold_572_38

Organism: SCN18_25_8_15_R2_B_Burkholderiales_69_21

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 47738..49012

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 424.0
  • Bit_score: 822
  • Evalue 1.60e-235
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXJ5_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 424.0
  • Bit_score: 822
  • Evalue 1.10e-235
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 424.0
  • Bit_score: 822
  • Evalue 3.20e-236

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCN_Comamonas_36x → SCN_Comamonas_36x → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAACATGCCCGACACAGCAGCACCCATTGCCATGGTGGCGCCTCTGGCGCGCCGTTCGCGCCAGGCGCGCATCGTCTGGGGCAGCCGCGTCGTCACGGTGGGCGGCGACGCGCCGGTGCGCGTGCAGTCCATGACCAATACCGATACGGTGGATGCGATCGGCACGGCCATCCAGGTCAAGGAGCTGGCGCAGGCCGGCTCCGAGTTCGTGCGCATCACGGTGAACACGCCGGAGGCCGCCGCAGCCGTGCCCTACATCCGCGAGCAGCTCGACCGCATGGGCGAGAGCGTGCCCCTGGTGGGCGACTTCCACTACAACGGCCACCGCCTGCTGACCGAGTTCCCGGACTGCGCGCAGGCGCTGTCCAAGTACCGCATCAACCCCGGCAACGTGGGCAAGGGCGACAAGCGCGACAAGCAGTTCGGCCAGATGATCGAGGCGGCGATGCGCTGGGACAAGGCCGTGCGCATCGGCGTCAACTGGGGCAGCCTGGACCAGGAGCTGCTGGCCGATCTGATGGACGCCAACAGCCGGCGGGCCGGGCCCTTGGACGCGCGCCAGGTCATGTACGAGGCGCTGATCACCTCGGCCATCGAGTCGGCGCGCCGCGCCGAGGCCATGGGCCTCGCGGGCGAGCAGATCATCCTGTCGTGCAAGGTCAGCGGCGTGCAGGACCTGATCGCCGTGTACCGCGAGCTGGCCCGGCGCTGCGACTACGCGCTGCACCTGGGCCTGACCGAGGCCGGCATGGGCACCAAGGGCATCGTGGCCTCGACCACGGCGCTGTCCATCCTGCTGCAGGAGGGCATAGGCGACACGATCCGCGTGTCGCTCACGCCCCAGCCCGGCGAGGCGCGCACCCAGGAGGTGGTCGTGGCGTCGGAGATATTGCAGTCGCTGGGGCTGCGCGCCTTCGTGCCCAGCGTGACCGCCTGCCCCGGCTGCGGTCGCACCACCAGCACCACCTTCCAGGAGCTGGCCAAGCAGATCGACGACTACCTGCGCGCGCAGATGCCCGTGTGGCGCATGCGCTACCCCGGCGTGGAGCGGCTCAAGGTGGCGGTCATGGGCTGCATCGTCAACGGCCCGGGCGAGAGCAAGCATGCCGACATCGGCATCAGCCTGCCGGGCACCGGCGAGGCGCCCGCGGCGCCCGTGTTCATCGACGGCGAGAAGGCGCTGACCCTGCGCGGCGACAACATCGCCCGGGAGTTCCAGGACATCGTCGACGACTACATCGCCAAGCGCTTCGGGGCGGGCGCCGACGCGTAG
PROTEIN sequence
Length: 425
MNMPDTAAPIAMVAPLARRSRQARIVWGSRVVTVGGDAPVRVQSMTNTDTVDAIGTAIQVKELAQAGSEFVRITVNTPEAAAAVPYIREQLDRMGESVPLVGDFHYNGHRLLTEFPDCAQALSKYRINPGNVGKGDKRDKQFGQMIEAAMRWDKAVRIGVNWGSLDQELLADLMDANSRRAGPLDARQVMYEALITSAIESARRAEAMGLAGEQIILSCKVSGVQDLIAVYRELARRCDYALHLGLTEAGMGTKGIVASTTALSILLQEGIGDTIRVSLTPQPGEARTQEVVVASEILQSLGLRAFVPSVTACPGCGRTTSTTFQELAKQIDDYLRAQMPVWRMRYPGVERLKVAVMGCIVNGPGESKHADIGISLPGTGEAPAAPVFIDGEKALTLRGDNIAREFQDIVDDYIAKRFGAGADA*