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SCN18_25_8_15_R4_B_scaffold_71

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Displaying items 271-300 of 469 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_71_trna_9
unknown

Not on your lists

comp(264781..264854)
DNA (74bp)
transferRNA Arg
SCN18_25_8_15_R4_B_scaffold_71_trna_8
unknown

Not on your lists

comp(264893..264966)
DNA (74bp)
transferRNA Pro
SCN18_25_8_15_R4_B_scaffold_71_263
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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265234..266526
DNA (1293bp) protein (431aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
trigger factor n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037A7FC3
trigger factor
SCN18_25_8_15_R4_B_scaffold_71_264
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266591..267214
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUV6_PSEUU
SCN18_25_8_15_R4_B_scaffold_71_265
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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267382..268671
DNA (1290bp) protein (430aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=12 Tax=Xanthomonas RepID=CLPX_XANAC
ATP-dependent Clp protease ATP-binding subunit ClpX
Clp protease ATP-binding protein {ECO:0000313|EMBL:KHM93414.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
SCN18_25_8_15_R4_B_scaffold_71_266
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

268869..271349
DNA (2481bp) protein (827aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122.;"
peptidase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DBD781
lon; ATP-dependent protease La
SCN18_25_8_15_R4_B_scaffold_71_267
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271577..271849
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein id=2826656 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
histone family protein DNA-binding protein
Tax=GWF1_Xanthomonadales_69_6_curated
SCN18_25_8_15_R4_B_scaffold_71_trna_3
unknown

Not on your lists

271954..272025
DNA (72bp)
transferRNA Val
SCN18_25_8_15_R4_B_scaffold_71_trna_4
unknown

Not on your lists

272139..272212
DNA (74bp)
transferRNA Asp
SCN18_25_8_15_R4_B_scaffold_71_268
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272334..274310
DNA (1977bp) protein (659aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
peptidylprolyl isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000379F6B7
peptidylprolyl isomerase
SCN18_25_8_15_R4_B_scaffold_71_269
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274401..275189)
DNA (789bp) protein (263aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
enoyl-ACP reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6B5CB
enoyl-(acyl carrier protein) reductase
SCN18_25_8_15_R4_B_scaffold_71_270
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275306..276115)
DNA (810bp) protein (270aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUV0_PSEUU
SCN18_25_8_15_R4_B_scaffold_71_271
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

276123..276785
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UBL4_XANAP
Uncharacterized protein {ECO:0000313|EMBL:KGQ18978.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_71_272
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

276782..277246
DNA (465bp) protein (155aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Ribonuclease H n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GW85_XANCT
ribonuclease H
SCN18_25_8_15_R4_B_scaffold_71_273
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

277246..277959
DNA (714bp) protein (238aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUU7_PSEUU
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIJ70951.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SCN18_25_8_15_R4_B_scaffold_71_274
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(278014..278718)
DNA (705bp) protein (235aa)
Protein phosphatase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQX2_PSEUP
Protein phosphatase {ECO:0000313|EMBL:KGQ18975.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
protein phosphatase
SCN18_25_8_15_R4_B_scaffold_71_trna_7
unknown

Not on your lists

comp(278953..279040)
DNA (88bp)
transferRNA Ser
SCN18_25_8_15_R4_B_scaffold_71_275
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

279057..279536
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BAL4_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFN47679.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_71_276
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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279551..280747
DNA (1197bp) protein (399aa)
Sodium/hydrogen exchanger n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UN85_PSEUP
Sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AER56589.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_71_277
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280744..281799)
DNA (1056bp) protein (352aa)
ADP-heptose--LPS heptosyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002ECBCE3
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KGM55482.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
glycosyl transferase family protein
SCN18_25_8_15_R4_B_scaffold_71_278
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281821..282564
DNA (744bp) protein (248aa)
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TPN2_STEMA
3-deoxy-D-manno-octulosonic-acid kinase
SCN18_25_8_15_R4_B_scaffold_71_trna_6
unknown

Not on your lists

comp(283068..283157)
DNA (90bp)
transferRNA Ser
SCN18_25_8_15_R4_B_scaffold_71_279
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283250..285022
DNA (1773bp) protein (591aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GWK2_XANCT
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KGQ18965.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
SCN18_25_8_15_R4_B_scaffold_71_280
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285068..285388
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F519F
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_71_281
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285436..286035
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQI1_PSEUP
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
recR; recombination protein RecR
SCN18_25_8_15_R4_B_scaffold_71_282
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286119..286469
DNA (351bp) protein (117aa)
histidine triad (HIT) protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B67E15
Histidine triad (HIT) protein {ECO:0000313|EMBL:KGM57115.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
SCN18_25_8_15_R4_B_scaffold_71_283
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286563..287189
DNA (627bp) protein (209aa)
pit accessory protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F74750
Stenotrophomonas maltophilia strain ZBG7B contig_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86856.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
pit accessory protein
SCN18_25_8_15_R4_B_scaffold_71_284
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

287202..288323
DNA (1122bp) protein (374aa)
inorganic phosphate transporter n=2 Tax=Xanthomonas RepID=UPI0003699C94
Inorganic phosphate transporter {ECO:0000313|EMBL:AKC87702.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
inorganic phosphate transporter
SCN18_25_8_15_R4_B_scaffold_71_285
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288359..288769)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ20737.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Uncharacterized protein id=2489083 bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter fulvus genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_71_286
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288800..289168
DNA (369bp) protein (123aa)
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FAA419
Cysteine methyltransferase {ECO:0000313|EMBL:AKC87704.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein
Displaying items 271-300 of 469 in total

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