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SCN18_25_8_15_R4_B_scaffold_71

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Displaying items 451-469 of 469 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_71_436
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(455456..456607)
DNA (1152bp) protein (384aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ04_ACIET
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACM33142.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCN18_25_8_15_R4_B_scaffold_71_437
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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comp(456604..457212)
DNA (609bp) protein (203aa)
TetR family transcriptional regulator n=1 Tax=Shewanella decolorationis S12 RepID=V1DKD2_9GAMM
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCN18_25_8_15_R4_B_scaffold_71_438
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(457370..459538)
DNA (2169bp) protein (723aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
catalase-peroxidase n=1 Tax=Xanthobacteraceae RepID=UPI00037E426A
katG; catalase
SCN18_25_8_15_R4_B_scaffold_71_439
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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459812..460858
DNA (1047bp) protein (349aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJB6_9GAMM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KGQ20526.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
LacI family transcriptional regulator
SCN18_25_8_15_R4_B_scaffold_71_440
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(460862..462592)
DNA (1731bp) protein (577aa)
cyclomaltodextrin glucanotransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B195
cyclomaltodextrin glucanotransferase
Cyclomaltodextrin glucanotransferase {ECO:0000313|EMBL:AJC45091.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_25_8_15_R4_B_scaffold_71_441
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(462607..464172)
DNA (1566bp) protein (522aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS13_PSEUU
MFS transporter permease {ECO:0000313|EMBL:KGQ20530.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
major facilitator superfamily protein
SCN18_25_8_15_R4_B_scaffold_71_442
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

464272..465882
DNA (1611bp) protein (537aa)
aglA; alpha-glucosidase AglA (EC:3.2.1.20)
Alpha-glucosidase n=1 Tax=uncultured bacterium RepID=S5ZCH6_9BACT
Alpha-glucosidase {ECO:0000313|EMBL:AGT18053.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCN18_25_8_15_R4_B_scaffold_71_443
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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465888..468008
DNA (2121bp) protein (707aa)
Glycoside hydrolase 97 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS11_PSEUU
Alpha-glucosidase {ECO:0000313|EMBL:AKC88413.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
glycoside hydrolase
SCN18_25_8_15_R4_B_scaffold_71_444
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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468292..471078
DNA (2787bp) protein (929aa)
TonB-dependent outer membrane receptor n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8G6X0_9XANT
TonB-dependent outer membrane receptor
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_71_445
SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(471216..471608)
DNA (393bp) protein (131aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003056ACD
Uncharacterized protein {ECO:0000313|EMBL:EYR66903.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_71_446
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(471749..472102)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI000262ADEC
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_71_447
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(472099..472581)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZJX1_XANCT
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_71_448
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(472687..474297)
DNA (1611bp) protein (537aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTI3_PSEUU
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:KGM54814.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
SCN18_25_8_15_R4_B_scaffold_71_449
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

474412..475755
DNA (1344bp) protein (448aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7G921_XANCT
23S rRNA methyltransferase
SCN18_25_8_15_R4_B_scaffold_71_450
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

475824..476360
DNA (537bp) protein (179aa)
Adenylate cyclase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQE8_PSEUP
CYTH domain protein {ECO:0000313|EMBL:KGM57512.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
adenylate cyclase
SCN18_25_8_15_R4_B_scaffold_71_451
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

476351..477403
DNA (1053bp) protein (351aa)
nagZ; beta N-acetyl-glucosaminidase (EC:3.2.1.52)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
Beta-hexosaminidase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KRF0_STEMA
SCN18_25_8_15_R4_B_scaffold_71_452
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

477400..477957
DNA (558bp) protein (186aa)
hypoxanthine phosphoribosyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B57C42
Uncharacterized protein {ECO:0000313|EMBL:KFN47629.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypoxanthine-guanine phosphoribosyltransferase
SCN18_25_8_15_R4_B_scaffold_71_453
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

478110..478859
DNA (750bp) protein (250aa)
Probable 6-oxopurine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
5''''-methylthioadenosine phosphorylase n=1 Tax=Xanthomonas RepID=UPI000262ADE5
SCN18_25_8_15_R4_B_scaffold_71_454
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

478993..479196
DNA (204bp) protein (68aa)
Cold shock protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR97_9GAMM
Cold-shock protein {ECO:0000313|EMBL:KGM55521.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
cold shock protein
Displaying items 451-469 of 469 in total

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