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SCN18_25_8_15_R4_B_scaffold_71

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Displaying items 151-180 of 469 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_71_146
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138248..138730
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI0002631D3E
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCN18_25_8_15_R4_B_scaffold_71_147
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138748..139017)
DNA (270bp) protein (90aa)
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Fe-S cluster protector protein
Probable Fe(2+)-trafficking protein id=2598462 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCN18_25_8_15_R4_B_scaffold_71_148
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139014..140066)
DNA (1053bp) protein (351aa)
A/G-specific adenine glycosylase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URN9_PSEUP
DNA glycosylase {ECO:0000313|EMBL:KGM55999.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
A/G-specific adenine glycosylase
SCN18_25_8_15_R4_B_scaffold_71_149
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140063..141328)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5E26B
Uncharacterized protein {ECO:0000313|EMBL:KGM56000.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
SCN18_25_8_15_R4_B_scaffold_71_150
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141325..142422)
DNA (1098bp) protein (366aa)
Signal recognition particle receptor FtsY n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS90_PSEUU
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCN18_25_8_15_R4_B_scaffold_71_151
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142450..143046
DNA (597bp) protein (199aa)
methyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A885
Methyltransferase {ECO:0000313|EMBL:KER84079.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
methyltransferase
SCN18_25_8_15_R4_B_scaffold_71_152
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143070..143570
DNA (501bp) protein (167aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
phosphopantetheine adenylyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030B1CFA
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_71_153
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143627..144115
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI000262A883
Signal peptide protein {ECO:0000313|EMBL:KGQ18541.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
signal peptide protein
SCN18_25_8_15_R4_B_scaffold_71_154
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144230..145951
DNA (1722bp) protein (574aa)
Gamma-glutamyltransferase n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FKH0_XANCI
gamma-glutamyltransferase 1
Gamma-glutamyltransferase {ECO:0000313|EMBL:EWC52245.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
SCN18_25_8_15_R4_B_scaffold_71_155
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145997..146887
DNA (891bp) protein (297aa)
Beta-lactamase domain protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS96_PSEUU
beta-lactamase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCN18_25_8_15_R4_B_scaffold_71_156
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146899..147285
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T0YYJ1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD37012.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_71_157
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147293..147925)
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Uracil phosphoribosyltransferase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T4N7_9DELT
upp; uracil phosphoribosyltransferase
SCN18_25_8_15_R4_B_scaffold_71_158
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148014..149522)
DNA (1509bp) protein (503aa)
Aminotransferase class-III protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HDY2_XANCT
Lysine 6-aminotransferase {ECO:0000313|EMBL:KGM56010.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
class III aminotransferase
SCN18_25_8_15_R4_B_scaffold_71_159
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149622..150095
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003132122
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADV27053.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCN18_25_8_15_R4_B_scaffold_71_160
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150175..151215
DNA (1041bp) protein (347aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003609565
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
SCN18_25_8_15_R4_B_scaffold_71_161
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151212..152339
DNA (1128bp) protein (376aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
tgt; queuine tRNA-ribosyltransferase (tRNA-guaninetransglycosylase) (guanine insertion enzyme) protein (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UE22_XANAP
SCN18_25_8_15_R4_B_scaffold_71_162
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152457..152816
DNA (360bp) protein (120aa)
Preprotein translocase subunit YajC n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URQ6_PSEUP
yajC; preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:AER55934.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_71_163
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152878..154719
DNA (1842bp) protein (614aa)
preprotein translocase subunit SecD n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000364DDD3
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
secD; preprotein translocase subunit SecD
SCN18_25_8_15_R4_B_scaffold_71_164
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154740..155708
DNA (969bp) protein (323aa)
Protein-export membrane protein SecF n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URQ8_PSEUP
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_71_165
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155812..156633)
DNA (822bp) protein (274aa)
Inositol monophosphatase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUK7_PSEUU
Inositol-1-monophosphatase {ECO:0000313|EMBL:KGQ18527.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
inositol monophosphatase
SCN18_25_8_15_R4_B_scaffold_71_166
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156729..157544
DNA (816bp) protein (272aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUK6_PSEUU
TrmH family RNA methyltransferase
SCN18_25_8_15_R4_B_scaffold_71_167
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157585..158520
DNA (936bp) protein (312aa)
Phosphate-binding protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CGB2_XANCA
Anion binding protein {ECO:0000313|EMBL:KGQ18525.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
phosphate-binding protein
SCN18_25_8_15_R4_B_scaffold_71_168
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158517..160655
DNA (2139bp) protein (713aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQU8_PSEUP
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:KGQ18524.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
diguanylate cyclase/phosphodiesterase
SCN18_25_8_15_R4_B_scaffold_71_169
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160674..161984)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUK3_PSEUU
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_71_170
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162156..164108)
DNA (1953bp) protein (651aa)
membrane protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B135
Membrane protein {ECO:0000313|EMBL:KGM57541.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
membrane protein
SCN18_25_8_15_R4_B_scaffold_71_171
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164101..165063)
DNA (963bp) protein (321aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A3676A
Membrane protein {ECO:0000313|EMBL:KGM55490.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
membrane protein
SCN18_25_8_15_R4_B_scaffold_71_172
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165067..166017)
DNA (951bp) protein (317aa)
Moxr-like ATPase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQH6_PSEUP
moxr-like ATPase
Moxr-like ATPase {ECO:0000313|EMBL:AER56979.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_71_173
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166071..167711
DNA (1641bp) protein (547aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUS2_PSEUU
NODE_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97967.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_71_174
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167647..168228)
DNA (582bp) protein (194aa)
Maf-like protein maf3 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T1P2_XANCT
Maf-like protein maf3 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
Maf-like protein
SCN18_25_8_15_R4_B_scaffold_71_175
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168225..168599)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ18955.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Displaying items 151-180 of 469 in total

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