ggKbase home page

SCN18_25_8_15_R4_B_scaffold_117_80

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 77005..77355

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Xanthomonas RepID=UPI00036F050B similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 109.0
  • Bit_score: 186
  • Evalue 1.10e-44
Membrane protein {ECO:0000313|EMBL:KGM54251.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 113.0
  • Bit_score: 196
  • Evalue 2.00e-47
lipid A Biosynthesis N-terminal domain family similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 110.0
  • Bit_score: 186
  • Evalue 3.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAGCATCGCCGCGCCGGTCGGCTTCATGGACACGCCGCTGGCCGCGCTGGCCTGGACCGGCATCCACATGACCCCGTGGAAGCTGATCGGGCTGGTCGGCGCCCTGATGTTCGGCGGGCGCTGGCTGGTGCAGTTCATCGCCAGCCGCCGCCACGGCAAGCCGGTGATCCCGCGCCTGTTCTGGTACATGAGCATCCTCGGCAGCGTGATGACGCTGAGCTACTTCATCTTCGGCAAGAACGACGCGGTCGGCATCCTGCAGAACCTGTTCCCGACCTTCACCGCCTGCTACAGCCTGTATCTGGACATCCGCCACCGCGGCTGGCACCGCGACCGCGCCGGCCACTGA
PROTEIN sequence
Length: 117
MSIAAPVGFMDTPLAALAWTGIHMTPWKLIGLVGALMFGGRWLVQFIASRRHGKPVIPRLFWYMSILGSVMTLSYFIFGKNDAVGILQNLFPTFTACYSLYLDIRHRGWHRDRAGH*