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SCN18_25_8_15_R4_B_scaffold_117

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Displaying items 1-30 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_117_1
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211..1440)
DNA (1230bp) protein (410aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Tyrosine--tRNA ligase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPS5_PSEUU
tyrosyl-tRNA synthetase
SCN18_25_8_15_R4_B_scaffold_117_2
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1613..3073
DNA (1461bp) protein (487aa)
Peptidase M23 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URI0_PSEUP
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AER54655.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_117_3
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3102..4232
DNA (1131bp) protein (377aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
anhydro-N-acetylmuramic acid kinase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000377D679
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_117_4
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4220..5527)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000370779F
Major Facilitator Superfamily transporter
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AGG90899.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R4_B_scaffold_117_5
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5524..6342)
DNA (819bp) protein (273aa)
catabolite repression control protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B358F
Catabolite repression control protein {ECO:0000313|EMBL:EYR65526.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
exodeoxyribonuclease III
SCN18_25_8_15_R4_B_scaffold_117_6
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6407..7057
DNA (651bp) protein (217aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AAE8
SCN18_25_8_15_R4_B_scaffold_117_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7044..7760
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B4EABF
Uncharacterized protein {ECO:0000313|EMBL:KIJ72672.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_117_8
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..10209)
DNA (2367bp) protein (789aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPR4_PSEUU
Phosphomannomutase {ECO:0000313|EMBL:EYR65521.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
SCN18_25_8_15_R4_B_scaffold_117_9
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10222..10683)
DNA (462bp) protein (154aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000376E569
SCN18_25_8_15_R4_B_scaffold_117_10
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10680..11336)
DNA (657bp) protein (219aa)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URJ1_PSEUP
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_117_11
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11333..11890)
DNA (558bp) protein (186aa)
coaBC; coA biosynthesis protein CoABC (EC:4.1.1.36 6.3.2.5)
DNA/pantothenate metabolism flavoprotein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z9A3_9XANT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:KGQ20135.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
SCN18_25_8_15_R4_B_scaffold_117_12
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11933..12661
DNA (729bp) protein (243aa)
DNA repair protein RadC n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPR1_PSEUU
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:ADV26016.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCN18_25_8_15_R4_B_scaffold_117_trna_4
unknown

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comp(12739..12810)
DNA (72bp)
transferRNA Gln
SCN18_25_8_15_R4_B_scaffold_117_13
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12880..13272)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=12 Tax=Xanthomonas RepID=RS9_XANAC
SSU ribosomal protein S9P
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. malvacearum str. GSPB2388.;"
SCN18_25_8_15_R4_B_scaffold_117_14
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13285..13713)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQ14_PSEUU
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCN18_25_8_15_R4_B_scaffold_117_15
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13895..14551
DNA (657bp) protein (219aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036ED43A
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
SCN18_25_8_15_R4_B_scaffold_117_16
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14666..15457)
DNA (792bp) protein (264aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Lysobacter enzymogenes RepID=Q7WZ08_LYSEN
S-adenosylmethionine decarboxylase
SCN18_25_8_15_R4_B_scaffold_117_17
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15601..16281
DNA (681bp) protein (227aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000372004F
Cyclic AMP receptor protein {ECO:0000313|EMBL:KGQ20010.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
DNA-binding transcriptional dual regulator Crp
SCN18_25_8_15_R4_B_scaffold_117_18
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16302..16772
DNA (471bp) protein (157aa)
GCN5 family acetyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5300D
Uncharacterized protein {ECO:0000313|EMBL:KFN48275.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
GCN5-related N-acetyltransferase
SCN18_25_8_15_R4_B_scaffold_117_19
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16786..17508)
DNA (723bp) protein (241aa)
Possible phosphoserine phosphatase n=1 Tax=Lysobacter enzymogenes RepID=Q7WZ04_LYSEN
Haloacid dehalogenase {ECO:0000313|EMBL:KGM55097.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
haloacid dehalogenase
SCN18_25_8_15_R4_B_scaffold_117_20
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17505..18293)
DNA (789bp) protein (263aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
indole-3-glycerol-phosphate synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FBE821
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCN18_25_8_15_R4_B_scaffold_117_21
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18326..19363)
DNA (1038bp) protein (346aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
anthranilate phosphoribosyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D74CF1
SCN18_25_8_15_R4_B_scaffold_117_22
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19386..19928)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJ25_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGI92807.1}; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
SCN18_25_8_15_R4_B_scaffold_117_23
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19931..20509)
DNA (579bp) protein (193aa)
Anthranilate synthase component II n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z6V4_XANCT
glutamine amidotransferase
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ADV28331.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCN18_25_8_15_R4_B_scaffold_117_24
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20577..21932)
DNA (1356bp) protein (452aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
histidine kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5CEFF
signal transduction histidine kinase
SCN18_25_8_15_R4_B_scaffold_117_25
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21938..22612)
DNA (675bp) protein (225aa)
XRE family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B778CA
XRE family transcriptional regulator {ECO:0000313|EMBL:EYR69243.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
response regulator
SCN18_25_8_15_R4_B_scaffold_117_26
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22846..23091)
DNA (246bp) protein (82aa)
SCN18_25_8_15_R4_B_scaffold_117_27
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23201..23410)
DNA (210bp) protein (70aa)
SCN18_25_8_15_R4_B_scaffold_117_28
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23567..25057)
DNA (1491bp) protein (497aa)
Anthranilate synthase component I n=5 Tax=Xanthomonas RepID=Q8PQ52_XANAC
Anthranilate synthase, aminase component {ECO:0000313|EMBL:KGQ20058.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
anthranilate synthase, component I
SCN18_25_8_15_R4_B_scaffold_117_29
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25495..27021
DNA (1527bp) protein (509aa)
hypothetical protein id=12495084 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
conserved membrane hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 187 in total

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