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SCN18_25_8_15_R4_B_scaffold_117

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Displaying items 151-180 of 187 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_117_148
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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154750..155562
DNA (813bp) protein (271aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP64_PSEUU
uroporphyrinogen III synthase HEM4
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:ADV25963.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCN18_25_8_15_R4_B_scaffold_117_149
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155708..158464)
DNA (2757bp) protein (919aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89312.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R4_B_scaffold_117_150
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158584..159516
DNA (933bp) protein (311aa)
coproporphyrinogen III oxidase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F8438E
coproporphyrinogen III oxidase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_117_151
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159815..160852
DNA (1038bp) protein (346aa)
esterase superfamily protein
esterase id=24657934 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative esterase superfamily {ECO:0000313|EMBL:ABC45188.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
SCN18_25_8_15_R4_B_scaffold_117_152
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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160973..161617
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A6B09
blc; outer membrane lipoprotein Blc
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_117_153
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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161623..161811
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Xanthomonas campestris RepID=UPI00005CDC3F
Uncharacterized protein {ECO:0000313|EMBL:EYR68416.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_117_154
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162004..162453
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI00036A73EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC44464.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_25_8_15_R4_B_scaffold_117_155
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162475..163500)
DNA (1026bp) protein (342aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI9_9GAMM
Threonine aldolase {ECO:0000313|EMBL:EIL91230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCN18_25_8_15_R4_B_scaffold_117_156
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163725..164048
DNA (324bp) protein (108aa)
Putative exported protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZY2_XANCT
EF hand domain-containing protein
Putative exported protein {ECO:0000313|EMBL:EKU24285.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
SCN18_25_8_15_R4_B_scaffold_117_157
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164212..164565
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain ADP) RepID=Q937A1_PSESD
alkylphosphonate utilization operon protein PhnA
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCN18_25_8_15_R4_B_scaffold_117_158
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164636..165154)
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004};; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Adenine phosphoribosyltransferase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT65_PSEUP
adenine phosphoribosyltransferase
SCN18_25_8_15_R4_B_scaffold_117_159
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165224..165982
DNA (759bp) protein (253aa)
haloacid dehalogenase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036B44B4
Haloacid dehalogenase {ECO:0000313|EMBL:KGM56382.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
haloacid dehalogenase
SCN18_25_8_15_R4_B_scaffold_117_160
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165979..166854
DNA (876bp) protein (292aa)
Short-chain alcohol dehydrogenase-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFK9_PHEZH
short-chain alcohol dehydrogenase-like protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCN18_25_8_15_R4_B_scaffold_117_161
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166886..168070)
DNA (1185bp) protein (395aa)
3-methylitaconate isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E239CE
3-methylitaconate isomerase {ECO:0000313|EMBL:AKC86388.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
AcnD-accessory protein PrpF
SCN18_25_8_15_R4_B_scaffold_117_162
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168148..170904
DNA (2757bp) protein (919aa)
DNA polymerase I n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DB74C0
DNA polymerase I {ECO:0000313|EMBL:AKC86920.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
DNA polymerase I
SCN18_25_8_15_R4_B_scaffold_117_163
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171300..171917
DNA (618bp) protein (206aa)
Homoserine/threonine efflux protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHE3_MYXSD
homoserine/threonine efflux protein
Homoserine/threonine efflux protein {ECO:0000313|EMBL:AGC47315.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCN18_25_8_15_R4_B_scaffold_117_164
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172027..172572
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000374271A
Type 12 methyltransferase {ECO:0000313|EMBL:EKE73014.1}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_117_165
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172600..173502
DNA (903bp) protein (301aa)
alpha/beta hydrolase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A8A887
Alpha/beta hydrolase {ECO:0000313|EMBL:KGM54001.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
alpha/beta hydrolase
SCN18_25_8_15_R4_B_scaffold_117_166
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173743..174549
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Actinobacillus capsulatus RepID=UPI0003721759
Bacteriophage Mu GP30-like protein {ECO:0000313|EMBL:EGY71746.1}; TaxID=754505 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter actinomycetemcomitans D17P-3.;"
bacteriophage Mu GP30-like protein
SCN18_25_8_15_R4_B_scaffold_117_167
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174690..175124
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI000363F126
Mu-like prophage protein gpG
Mu-like prophage protein gpG {ECO:0000313|EMBL:BAO81042.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
SCN18_25_8_15_R4_B_scaffold_117_168
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175180..175407)
DNA (228bp) protein (76aa)
SCN18_25_8_15_R4_B_scaffold_117_169
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175519..175776)
DNA (258bp) protein (86aa)
SCN18_25_8_15_R4_B_scaffold_117_170
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175829..176839)
DNA (1011bp) protein (337aa)
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97624.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KIQ97624.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=C6G4C8_9BACT
NAD-dependent epimerase/dehydratase
SCN18_25_8_15_R4_B_scaffold_117_171
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176913..178520
DNA (1608bp) protein (536aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEH5_9GAMM
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG89169.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R4_B_scaffold_117_172
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178534..179460)
DNA (927bp) protein (309aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX11_PSEUU
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:AKC86868.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
lipid A biosynthesis acyltransferase
SCN18_25_8_15_R4_B_scaffold_117_173
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179489..179929
DNA (441bp) protein (147aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KT85_STEMA
dtd; D-tyrosyl-tRNA(Tyr) deacylase
SCN18_25_8_15_R4_B_scaffold_117_174
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180021..181883
DNA (1863bp) protein (621aa)
RNA polymerase sigma factor RpoD n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000312AE83
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
rpoD; RNA polymerase sigma-70 factor, rpod protein
SCN18_25_8_15_R4_B_scaffold_117_trna_1
unknown

Not on your lists

181962..182034
DNA (73bp)
transferRNA Met
SCN18_25_8_15_R4_B_scaffold_117_175
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182050..183234)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5DDEA
Two-component sensor histidine kinase {ECO:0000313|EMBL:KGQ19320.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
signal transduction histidine kinase
SCN18_25_8_15_R4_B_scaffold_117_176
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183231..183923)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4455A
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KGQ19321.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Displaying items 151-180 of 187 in total

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