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SCN18_25_8_15_R4_B_scaffold_117_83

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 79688..80836

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, rnd family, mfp subunit n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT24_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 385.0
  • Bit_score: 340
  • Evalue 1.20e-90
efflux transporter, rnd family, mfp subunit similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 385.0
  • Bit_score: 340
  • Evalue 3.30e-91
Efflux transporter, rnd family, mfp subunit {ECO:0000313|EMBL:AER56089.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 385.0
  • Bit_score: 340
  • Evalue 1.60e-90

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGAGCCCGCGCCTGCGCCGCGCCGCCGGCATCGCCGGTGCCGCCGCCATCCTCGCCCTGCTGGGCTGGCGGCTGTGGCCGCGCAGCGAGGCCACCGCCGCCGCCGCGGCTCCGGCCGCCGCCCCTGATGGCAGCGTGCAGCTGGCGCCCTCGCAGGTGCAGGGCCTGGGCATCGCGCTGGCGCCGGTGCGGCGCGCCGACCGCGTGCCGGTCACCGGCCTGCCGGCGCAGACCGAGGCGCCGCTGGAAGCCAGCCAGCAGGTGGCCTCGCCGTGGGCGGGCACGGTCTCGGCGCTGCTGGTGCACGAAGGCGAGCAGGTCCGCGCCGGGCAGCCGGTGCTGCGCCTGCGCAGCCAGGATGCCTTGCGCGCGGGCACCGAGCTGGCGCGCGCCGGCAGCGAGGCGGAGGTCGCCAGTCGCCAGGCGCGGCGCGATGCGCAGCTGCTGGCGGAAGGCATCATCCCGGCGGCGCGCAGCGAGCAGAGCCAGGCCCAGGCGCGCGCCGCGCAGGCGGAACTGGCGCGCGCGCGCGATGCCCTGGGCGGGGTCCGCGTGCGTCTTGCAGACGGCGGCGAGATCGAACTGCTGGCGCCGATCGCCGGCAAGGTGCTGCGGCGCATGGTGCGCCCCGGGGACGCGCTGCCGGCACAGGCGCCGGCGCTGCTGATCGCCGACCCCGCGCGCCTGGACATCGGCTTCACGGTCGCCGCCGGGCTGCGCGCGCAGCTCGCGCCGGGGCTGCGGGTGGCGCTGGCCGACGGCAGCGCGGCGCGGGTGGCGGCGATCGGCGCCGACCTCGACCCGGCCAGCCAGCAGGTGCCGGTGCGCGCCCGTTTCGAGGACCCCGCCGGGCACGTCCCCGGCGAGCGCTTCGCGGTGACCCTGCTGCTGCCAGCCCCGGCCGACGCGCTGGCGATCCCGGCCCAGGCCCTGCTGCCAGACGGCGAACGCCACGTGGCCTACGCCCGTGACGGCGACCGCTTCCGCGCCGTGCGCATCCCCCGCGTGCTCGGGAACGACGGCGTGCACGCGGTGGTGCAGGCCCCCGCGCTGCGCCCCGGGATGGACGTGGTGACCCGCGGCACTGTCGCCCTGAAGGCGCTGCTGCCGGCGCCGGCCGGCGCGCCCGCCGGCGGCAGCGCGCAGTGA
PROTEIN sequence
Length: 383
MSPRLRRAAGIAGAAAILALLGWRLWPRSEATAAAAAPAAAPDGSVQLAPSQVQGLGIALAPVRRADRVPVTGLPAQTEAPLEASQQVASPWAGTVSALLVHEGEQVRAGQPVLRLRSQDALRAGTELARAGSEAEVASRQARRDAQLLAEGIIPAARSEQSQAQARAAQAELARARDALGGVRVRLADGGEIELLAPIAGKVLRRMVRPGDALPAQAPALLIADPARLDIGFTVAAGLRAQLAPGLRVALADGSAARVAAIGADLDPASQQVPVRARFEDPAGHVPGERFAVTLLLPAPADALAIPAQALLPDGERHVAYARDGDRFRAVRIPRVLGNDGVHAVVQAPALRPGMDVVTRGTVALKALLPAPAGAPAGGSAQ*