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SCN18_25_8_15_R4_B_scaffold_117_90

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 88609..88773

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L33 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003083940 similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 54.0
  • Bit_score: 110
  • Evalue 2.80e-22
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 54.0
  • Bit_score: 110
  • Evalue 3.90e-22
rpmG; 50S ribosomal protein L33 similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 54.0
  • Bit_score: 107
  • Evalue 8.60e-22

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGGCTTCCAAGCGCGACAAGATCCGCCTGATCTCCTCGGCCGGCACCGGCCACTTCTACACCACCGACAAGAACAAGAAGAACACGCCGAACAAGATGGAGGTCAGCAAGTACGACCCCGTCGTTCGCAAGCACGTGATCTACAAGGAAGGCAAGATCAAGTAA
PROTEIN sequence
Length: 55
MASKRDKIRLISSAGTGHFYTTDKNKKNTPNKMEVSKYDPVVRKHVIYKEGKIK*