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SCN18_25_8_15_R4_B_scaffold_117_179

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 185636..186550

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 294.0
  • Bit_score: 472
  • Evalue 2.80e-130
hemC; porphobilinogen deaminase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 303.0
  • Bit_score: 438
  • Evalue 1.60e-120
Porphobilinogen deaminase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=HEM3_STRMK similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 303.0
  • Bit_score: 438
  • Evalue 5.50e-120

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGACCCGCCTGCGCATCGCCACCCGCAAGAGCCCGCTCGCCCTGTGGCAGACCGAGCACGTCGCCGCCCGCCTGCAGCAGGCGCACCCTGGCCTTGCGGTCGAGCTGGTGCCGCTGAGCACCCGCGGCGACGAGATCCTCGACCGCTCGCTGGCGGCGATCGGCGGCAAGGGCCTGTTCCTGAAGGAACTGGAGCTGGCGATGCAGCGCTTTGATGCCGACTGCGCCGTGCATTCGCTCAAGGACGTGCCGATGGAGCTGGAGCCGGGCTTCGCGCTGGGCGCGATCCTGGCCCGCCACGATCCGGCAGACGCGTTCGTCAGCCCGCATTTTGCGGACCTGTCCGCGCTGCCGCCGGGGGCGCGGGTCGGCACCTCCTCGCTGCGCCGGCAGGCGCAGCTGCGCGCGCTGCGGCCCGACCTCGATCTGCGCGACCTGCGCGGCAACGTGAACACCCGCCTGGCCAGGCTCGATGCCGGCGACTACGACGCGATCGTGCTGGCCTGCGCCGGGCTGGAGCGGCTGGGGCTGGGCGCGCACGTACGTTCCCGACTGACGGCACCGGACTGGCTACCGGCGCCGGCGCAGGGCGCGATCGCGATCGAATGCCGCAGCGACGATGCCGCCACCCGCGCGCTGTGCGCGGCGCTGGACGATCCCGCCACCCGCACCTGCGTGGAAGCCGAGCGCGCGATGAACCGTGCCCTGCACGGCAGCTGCCACGTGCCGGTGGCGGCGCTGGCCACCCTGTCCGGCGCGCGCCTGCACCTGCAGGGGCTGGTCGGTAGCGCCAGCGACGGCCGCCAGGTGCGGGCGCAGGCGGAAGGATCGGCAGCCGACCCGGACGCGCTGGGGATGACGGTGGCACGGGCACTGCTGGCGCAGGGCGCGCGCGCGCTGATCGATGCCACCTGA
PROTEIN sequence
Length: 305
MTRLRIATRKSPLALWQTEHVAARLQQAHPGLAVELVPLSTRGDEILDRSLAAIGGKGLFLKELELAMQRFDADCAVHSLKDVPMELEPGFALGAILARHDPADAFVSPHFADLSALPPGARVGTSSLRRQAQLRALRPDLDLRDLRGNVNTRLARLDAGDYDAIVLACAGLERLGLGAHVRSRLTAPDWLPAPAQGAIAIECRSDDAATRALCAALDDPATRTCVEAERAMNRALHGSCHVPVAALATLSGARLHLQGLVGSASDGRQVRAQAEGSAADPDALGMTVARALLAQGARALIDAT*