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SCN18_25_8_15_R4_B_scaffold_195_7

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(9256..9741)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031C5044 similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 160.0
  • Bit_score: 278
  • Evalue 3.90e-72
Diguanylate cyclase {ECO:0000313|EMBL:AKC87203.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 160.0
  • Bit_score: 278
  • Evalue 3.20e-72
GAF sensor protein similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 160.0
  • Bit_score: 276
  • Evalue 3.20e-72

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGAGCTTCTCCTTCTCTCCTCTGACCGGCACCAAGCCGGAGCGCTATGCGCAGCTGCTGGAGCAGGTGCGCGCGCTGCTGCACGGCGAACGCGACCGCATCGCCAATGCCGCCAATCTGTCCGCGCTGGTCTACCACGCCCTGCCCGCCCTCAACTGGGTGGGCTTCTATTTCTTCGACGGCACCGAGCTGGTGGTCGGCCCGTTCCAGGGCCTGCCGGCCTGCGTACGCATCCCGCTGGCGAAGGGCGTGTGCGGCGCCGCCGCGCGCACCCGCCAGACCCAGCGCGTCGACGACGTGCACGCCTTCCCCGGCCACATCGCTTGCGATTCGGCCAGCCGCTCCGAGCTGGTGGTGCCGCTGTACCGGGGCGATGCGCTGCTCGGCGTGTTCGACCTCGACAGCCCGCTGCCGGCGCGCTTCGACGCTGACGACCAGCGCGGGCTGGAGGCGATCGCCGCGGCCTACCTGGAGTCGCTGGGGTGA
PROTEIN sequence
Length: 162
MSFSFSPLTGTKPERYAQLLEQVRALLHGERDRIANAANLSALVYHALPALNWVGFYFFDGTELVVGPFQGLPACVRIPLAKGVCGAAARTRQTQRVDDVHAFPGHIACDSASRSELVVPLYRGDALLGVFDLDSPLPARFDADDQRGLEAIAAAYLESLG*