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SCN18_25_8_15_R4_B_scaffold_195

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Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_195_1
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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237..1610
DNA (1374bp) protein (458aa)
Bifunctional protein GlmU n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVC2_PSEUP
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Glmu
SCN18_25_8_15_R4_B_scaffold_195_2
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1816..3648
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035C88D3
SCN18_25_8_15_R4_B_scaffold_195_3
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3645..4319
DNA (675bp) protein (225aa)
Multiple antibiotic resistance (MarC)-related protein n=2 Tax=mine drainage metagenome RepID=T1AX57_9ZZZZ
Multiple antibiotic resistance (MarC)-related protein {ECO:0000313|EMBL:EQD62047.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
multiple antibiotic resistance (MarC)-like protein
SCN18_25_8_15_R4_B_scaffold_195_4
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4426..6555
DNA (2130bp) protein (710aa)
diguanylate cyclase/phosphodiesterase id=12494048 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diguanylate cyclase/phosphodiesterase
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) {ECO:0000313|EMBL:AAZ98531.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_25_8_15_R4_B_scaffold_195_5
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6616..8508)
DNA (1893bp) protein (631aa)
vitamin B12 receptor protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003043AE3
TonB-dependent receptor
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_195_6
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8879..9259)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SX92_XANCT
TfoX C-terminal domain-containing protein {ECO:0000313|EMBL:KGQ18184.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_195_7
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9256..9741)
DNA (486bp) protein (162aa)
diguanylate cyclase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031C5044
Diguanylate cyclase {ECO:0000313|EMBL:AKC87203.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
GAF sensor protein
SCN18_25_8_15_R4_B_scaffold_195_8
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9816..10490
DNA (675bp) protein (225aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
dithiobiotin synthetase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036E5760
dethiobiotin synthase
SCN18_25_8_15_R4_B_scaffold_195_9
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10662..13838)
DNA (3177bp) protein (1059aa)
hypothetical protein, partial n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000380E075
Acriflavine resistance protein B {ECO:0000313|EMBL:AKC85785.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
acriflavin resistance protein
SCN18_25_8_15_R4_B_scaffold_195_10
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13911..15101)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036D21F2
Uncharacterized protein {ECO:0000313|EMBL:AKC85784.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
RND family efflux transporter MFP subunit
SCN18_25_8_15_R4_B_scaffold_195_11
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15335..15736)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031FED26
Uncharacterized protein {ECO:0000313|EMBL:EYR67583.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_195_12
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15885..16421)
DNA (537bp) protein (179aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
RNA pyrophosphohydrolase id=2976982 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
dinucleoside polyphosphate hydrolase
SCN18_25_8_15_R4_B_scaffold_195_trna_1
unknown

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16543..16616
DNA (74bp)
transferRNA Met
SCN18_25_8_15_R4_B_scaffold_195_13
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16695..17048
DNA (354bp) protein (118aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003765C53
6-carboxy-5,6,7,8-tetrahydropterin synthase
SCN18_25_8_15_R4_B_scaffold_195_14
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17077..19362)
DNA (2286bp) protein (762aa)
histidine kinase n=6 Tax=Xanthomonas axonopodis RepID=UPI0002FD3EDF
Two-component system sensory histidine kinase {ECO:0000313|EMBL:KGQ18216.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
two-component system sensor protein
SCN18_25_8_15_R4_B_scaffold_195_15
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19359..21053)
DNA (1695bp) protein (565aa)
Two-component system regulatory protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GFV7_XANCT
Two-component system sensory histidine kinase {ECO:0000313|EMBL:KGQ18217.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
response regulator receiver protein
SCN18_25_8_15_R4_B_scaffold_195_16
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21275..22012
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUM5_PSEUP
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCN18_25_8_15_R4_B_scaffold_195_17
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22044..22418
DNA (375bp) protein (125aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPK7_PSEUU
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
iron-sulfur cluster assembly accessory protein
SCN18_25_8_15_R4_B_scaffold_195_18
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22415..23344
DNA (930bp) protein (310aa)
NAD+ diphosphatase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SXX9_XANCT
NADH pyrophosphatase {ECO:0000313|EMBL:KGQ18223.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
NUDIX hydrolase family protein
SCN18_25_8_15_R4_B_scaffold_195_19
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23355..24236
DNA (882bp) protein (294aa)
Signaling modulator of AmpD, AmpE n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TX42_STEMA
Membrane protein {ECO:0000313|EMBL:EYR67573.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
transmembrane protein
SCN18_25_8_15_R4_B_scaffold_195_20
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24274..26190)
DNA (1917bp) protein (639aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C724_9XANT
Glycerol acyltransferase {ECO:0000313|EMBL:AKC86291.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
glycerol acyltransferase
SCN18_25_8_15_R4_B_scaffold_195_21
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26234..27598)
DNA (1365bp) protein (455aa)
Peptidase M28 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UN83_PSEUP
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AER56587.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_195_22
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27750..30566
DNA (2817bp) protein (939aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWN8_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER57735.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_25_8_15_R4_B_scaffold_195_23
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30563..31381
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B03A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC47664.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_25_8_15_R4_B_scaffold_195_24
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31424..32755)
DNA (1332bp) protein (444aa)
Filamentation induced by cAMP protein Fic n=1 Tax=mine drainage metagenome RepID=T1CAU0_9ZZZZ
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EQD63615.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_195_25
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32984..33760)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUQ2_PSEUU
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_195_26
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33962..35083
DNA (1122bp) protein (374aa)
NADH:flavin oxidoreductase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B920_9XANT
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EGD11086.1}; Flags: Precursor;; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
oxidoreductase
SCN18_25_8_15_R4_B_scaffold_195_27
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35108..35977
DNA (870bp) protein (290aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPL3_PSEUU
Extradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:AKC88196.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
extradiol ring-cleavage dioxygenase class III protein subunit B
SCN18_25_8_15_R4_B_scaffold_195_28
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36013..36432)
DNA (420bp) protein (140aa)
Death-on-curing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WS97_9GAMM
Death-on-curing protein {ECO:0000313|EMBL:EIM02339.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
death-on-curing family protein
SCN18_25_8_15_R4_B_scaffold_195_29
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36442..36663)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4M9_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:AKC85857.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
Displaying items 1-30 of 116 in total

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