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SCN18_25_8_15_R4_B_scaffold_195_58

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 71489..72808

Top 3 Functional Annotations

Value Algorithm Source
Lipid a core-o-antigen ligase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GA73_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 434.0
  • Bit_score: 498
  • Evalue 6.50e-138
Membrane protein {ECO:0000313|EMBL:KGO98134.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 430.0
  • Bit_score: 498
  • Evalue 5.40e-138
membrane protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 432.0
  • Bit_score: 494
  • Evalue 2.70e-137

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAACGGGGCGCGGATGGAGCCGGCGCGCGCGCTGCGTTGGGCGCCGGCCTGGGTGCTGCTGGTGGTGGCGCTGTGGCCGCTGCACGGCATCGCGACGACGCTGCTGGCCGCGGGGGCGCTGGCGGGGCTGGCCGAGCTGATGCTGCGCCGCTTCCGCGGAGGCCTGGGCCTGATGTCGGGGCCGGCGTGGGCGCTGACCGGCGTGCTGTTCGCCGCGTACTGGCTGCCGGAGCTGCTGTCGCTGATCGGCGCGGCCGACTGGACGCATGGCCTGCGCAAGGTGCTGAGTGACATCCTGGTGCTGCCGCTGCTGTGGCTGGCCGCCGCCTCGGTGGCGGTGGCGCGCGGGCGGCAGATCGTATTTTCCGGGCTGGGCCTGATCGCGCTGGTGTGGACGGTGGATGCGCTGGTCGCGGCCGGCACCGGCACCAGCCCACTGTTCTGGCTGCTCGACCGCGGCCGCCTGGCGCTGCTGGGGCAGCCGCTGTGCCAGCCGCAGGACGTGCTGGCGCCGGGACGCCTGGCCGGGGTGTTCGGGCCATGCAATCCCAAGCTCGGGATCGTACTGGCCAGCCTGTCGCCGTTCGCGCTGGAGATGGCATGGCAGCGCGCGGGACGCCCCGGCTGGTGGCTGGCGGCGCTGGCGATCGGCGCGGTGGTGCTGCTGGCCGGCGCGCGCGCGGCCTGGCTGACCTATGCGCTGGTGCTGCTGTGGTCGGGCTGGCGCGCGCTGGGCCGGCGCGGGCTGCTGGCGCTGCTGGCGGTGATGCTGCTGGGAATGGGCGCGCTGGCGGCGTGGTCGCCCTTGGTGCAGGAACGGGTGCAACGCAGCGCGCAGGCGCTGGATGGCGGCGCGGTCGCGCTGGATGCGGCGCTGTCCGGGCGACTGCGGATCTGGTCGGGGGCGCTGTGCATGCTGCGCGAACACCCGCTCAACGGGGTCGGTGTGCGCGGGTTCCGCGCGGCGTTCCCTGCCTGCGATCCGCATCCGGAACGGGCGCCGGCGTGGGGCGCGGGGCCGCCGCTGCACGCGCATCAACTGGTGCTGGAGGTGGCCAGCGAGACCGGCCTGGTCGGCCTGCTGCTGTGGCTGGCCGGGGCCGCGTTGGCGTGGCGGGCCTGGCGTTATGCCGACCCCGTCGCGCGCGCGCGCGCGCATCCGGCGATGCTGGCGCTGGCGGTCAGCGTGTTCCCGCTCAACACCCATCTGGCCGCGTATTCCACCTTCTGGGGCGGCGTGCTGCTGCTGCTGGCCGGGCTCTACGTCGGCAGCCTGTGGGGCCCGGTGGAGGCGGAGGCCAGTGCGCCTCAGCGATAG
PROTEIN sequence
Length: 440
MNGARMEPARALRWAPAWVLLVVALWPLHGIATTLLAAGALAGLAELMLRRFRGGLGLMSGPAWALTGVLFAAYWLPELLSLIGAADWTHGLRKVLSDILVLPLLWLAAASVAVARGRQIVFSGLGLIALVWTVDALVAAGTGTSPLFWLLDRGRLALLGQPLCQPQDVLAPGRLAGVFGPCNPKLGIVLASLSPFALEMAWQRAGRPGWWLAALAIGAVVLLAGARAAWLTYALVLLWSGWRALGRRGLLALLAVMLLGMGALAAWSPLVQERVQRSAQALDGGAVALDAALSGRLRIWSGALCMLREHPLNGVGVRGFRAAFPACDPHPERAPAWGAGPPLHAHQLVLEVASETGLVGLLLWLAGAALAWRAWRYADPVARARAHPAMLALAVSVFPLNTHLAAYSTFWGGVLLLLAGLYVGSLWGPVEAEASAPQR*