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SCN18_25_8_15_R4_B_scaffold_1034

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1034_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20..841)
DNA (822bp) protein (274aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EGP09142.1}; EC=1.3.8.- {ECO:0000313|EMBL:EGP09142.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
acyl-CoA dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002EBFB37
acyl-CoA dehydrogenase
SCN18_25_8_15_R4_B_scaffold_1034_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(946..1899)
DNA (954bp) protein (318aa)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate synthase {ECO:0000255|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000255|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000255|HAMAP-Rule:MF_00206}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Lipoyl synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=LIPA_PARL1
lipoyl synthase
SCN18_25_8_15_R4_B_scaffold_1034_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2075..3679
DNA (1605bp) protein (535aa)
aas; 2-acylglycerophosphoethanolamine acyltransferase (EC:2.3.1.40 6.2.1.20)
2-acylglycerophosphoethanolamine acyltransferase/Acyl-[acyl-carrier-protein] synthetase {ECO:0000313|EMBL:ABI75576.1}; EC=2.3.1.40 {ECO:0000313|EMBL:ABI75576.1};; EC=6.2.1.20 {ECO:0000313|EMBL:ABI75576.1};; TaxID=228405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas neptunium (strain ATCC 15444).;"
Aas bifunctional protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B627AA
SCN18_25_8_15_R4_B_scaffold_1034_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3669..5474
DNA (1806bp) protein (602aa)
phoD; alkaline phosphatase D (EC:3.1.3.1)
Alkaline phosphatase D {ECO:0000313|EMBL:ACI99776.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ACI99776.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Alkaline phosphatase D n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPS4_RHOCS
SCN18_25_8_15_R4_B_scaffold_1034_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5498..6577)
DNA (1080bp) protein (360aa)
hypothetical protein id=5803592 bin=OD1_GWC2_34_28 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
SCN18_25_8_15_R4_B_scaffold_1034_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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6948..7433
DNA (486bp) protein (162aa)
bacterioferritin n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4727C
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
bacterioferritin
SCN18_25_8_15_R4_B_scaffold_1034_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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7638..8855
DNA (1218bp) protein (406aa)
poly(3-hydroxybutyrate) depolymerase n=1 Tax=Xanthobacteraceae RepID=UPI00037B3528
Uncharacterized protein {ECO:0000313|EMBL:CEJ15250.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
polyhydroxyalkanoate depolymerase
SCN18_25_8_15_R4_B_scaffold_1034_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8868..10328)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00037F18FC
Uncharacterized protein {ECO:0000313|EMBL:EJL88933.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1034_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10462..10755
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8URR6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFK14714.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1034_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10944..11336
DNA (393bp) protein (131aa)
PadR family transcriptional regulator n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B349B1
PadR family transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCN18_25_8_15_R4_B_scaffold_1034_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11314..12216
DNA (903bp) protein (301aa)
Sensor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMD0_9GAMM
Membrane protein {ECO:0000313|EMBL:KGI77640.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
sensor protein
SCN18_25_8_15_R4_B_scaffold_1034_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12455..14080
DNA (1626bp) protein (542aa)
Peptidase M23B n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTZ0_PARL1
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABS63373.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1034_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14150..16780)
DNA (2631bp) protein (877aa)
Chaperone protein ClpB n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QM69_METSZ
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034, ECO:0000313|EMBL:CCJ06273.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
clpB; chaperone protein ClpB
SCN18_25_8_15_R4_B_scaffold_1034_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16913..17410)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI000373CCAB
Uncharacterized protein {ECO:0000313|EMBL:KJF75059.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
Displaying 14 items

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