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SCN18_25_8_15_R4_B_scaffold_1078

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1078_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..959)
DNA (957bp) protein (319aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BZF6_HYPNA
Acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:KDA00016.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
acyl-CoA dehydrogenase family protein
SCN18_25_8_15_R4_B_scaffold_1078_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1065..2312)
DNA (1248bp) protein (416aa)
PREDICTED: cytochrome P450 55A3-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14A15
p450; cytochrome P450
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_25_8_15_R4_B_scaffold_1078_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2464..3666)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYV6_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95629.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
SCN18_25_8_15_R4_B_scaffold_1078_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3663..4343)
DNA (681bp) protein (227aa)
ABC transporter related id=2096212 bin=GWB2_Desulfobacterales_56_26 species=Shewanella frigidimarina genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter
Tax=GWB2_Desulfobacterales_56_26_curated
SCN18_25_8_15_R4_B_scaffold_1078_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4370..5578)
DNA (1209bp) protein (403aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6R9_9NEIS
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEG07644.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
RND family efflux transporter MFP subunit
SCN18_25_8_15_R4_B_scaffold_1078_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5697..5909)
DNA (213bp) protein (71aa)
SCN18_25_8_15_R4_B_scaffold_1078_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5973..6869)
DNA (897bp) protein (299aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A637_METMM
alpha/beta hydrolase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCN18_25_8_15_R4_B_scaffold_1078_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6893..7501)
DNA (609bp) protein (203aa)
uracil-DNA glycosylase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039FAA65
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:GAK45221.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
uracil-DNA glycosylase
SCN18_25_8_15_R4_B_scaffold_1078_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7501..8649)
DNA (1149bp) protein (383aa)
PREDICTED: acyl-CoA dehydrogenase family member 9, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AE71
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:GAK45220.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
acyl-CoA dehydrogenase
SCN18_25_8_15_R4_B_scaffold_1078_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8732..9295)
DNA (564bp) protein (188aa)
SCN18_25_8_15_R4_B_scaffold_1078_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9341..10375
DNA (1035bp) protein (345aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS13_PARL1
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABS62696.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1078_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10350..11603)
DNA (1254bp) protein (418aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS07_PARL1
Na+ dependent nucleoside transporter {ECO:0000313|EMBL:GAK45215.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Na+ dependent nucleoside transporter
SCN18_25_8_15_R4_B_scaffold_1078_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11672..12838
DNA (1167bp) protein (389aa)
Acyltransferase 3 n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHC1_NITSI
acyltransferase
Acyltransferase 3 {ECO:0000313|EMBL:AEJ01372.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCN18_25_8_15_R4_B_scaffold_1078_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12899..13810
DNA (912bp) protein (304aa)
HlyD family secretion protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGS9_PHEZH
HlyD family secretion protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_25_8_15_R4_B_scaffold_1078_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13823..14758)
DNA (936bp) protein (312aa)
enoyl-CoA hydratase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B4EE9D
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIE52887.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
paaG; enoyl-CoA hydratase
SCN18_25_8_15_R4_B_scaffold_1078_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14945..15145
DNA (201bp) protein (67aa)
SCN18_25_8_15_R4_B_scaffold_1078_17
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15356..15487
DNA (132bp) protein (44aa)
SCN18_25_8_15_R4_B_scaffold_1078_18
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15489..16247)
DNA (759bp) protein (253aa)
SpoVR n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GJ98_RUEST
SpoVR family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
Displaying 18 items

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