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SCN18_25_8_15_R4_B_scaffold_1135

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1135_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..134)
DNA (132bp) protein (44aa)
SCN18_25_8_15_R4_B_scaffold_1135_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230..1222)
DNA (993bp) protein (331aa)
Serine/threonine dehydratase {ECO:0000313|EMBL:KJB97083.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KJB97083.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
serine/threonine dehydratase (EC:4.3.1.19)
Serine/threonine dehydratase n=2 Tax=Oligotropha carboxidovorans RepID=B6JBD8_OLICO
SCN18_25_8_15_R4_B_scaffold_1135_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1250..2167
DNA (918bp) protein (306aa)
Zinc ABC transporter periplasmic substrate-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AG29_AZOBR
znuA; zinc ABC transporter; periplasmic substrate-binding component
Zinc ABC transporter periplasmic substrate-binding component {ECO:0000313|EMBL:CCC96564.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCN18_25_8_15_R4_B_scaffold_1135_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2247..3221
DNA (975bp) protein (325aa)
UPI0003CFC099 related cluster n=1 Tax=unknown RepID=UPI0003CFC099
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
corA; Mg2 transporter protein CorA family protein
SCN18_25_8_15_R4_B_scaffold_1135_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3227..3634)
DNA (408bp) protein (136aa)
GCN5-related N-acetyltransferase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QXW3_PIRSD
N-acetyltransferase GCN5
Tax=CG_Syntroph_01
SCN18_25_8_15_R4_B_scaffold_1135_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3657..4664)
DNA (1008bp) protein (336aa)
D-alanine--D-alanine ligase domain-containing protein n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30WV9_DESDG
D-alanine--D-alanine ligase
D-alanine--D-alanine ligase domain-containing protein {ECO:0000313|EMBL:ABB39837.1}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
SCN18_25_8_15_R4_B_scaffold_1135_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4666..5667)
DNA (1002bp) protein (334aa)
D-alanine--D-alanine ligase id=4879769 bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
D-alanine--D-alanine ligase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
SCN18_25_8_15_R4_B_scaffold_1135_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5701..7011)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037D203C
lysine 2,3-aminomutase YodO family protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCN18_25_8_15_R4_B_scaffold_1135_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7407..9116)
DNA (1710bp) protein (570aa)
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTT7_PHAMO
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family {ECO:0000313|EMBL:CCG41794.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
putative glycosyl transferase, family 39
SCN18_25_8_15_R4_B_scaffold_1135_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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9202..9918
DNA (717bp) protein (239aa)
Glycosyl transferase family protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZT3_CAUCN
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AAK22456.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCN18_25_8_15_R4_B_scaffold_1135_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9920..10243
DNA (324bp) protein (108aa)
Lipid A biosynthesis protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003798A12
Uncharacterized protein {ECO:0000313|EMBL:KFF50645.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1135_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10289..10735
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAE2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB47608.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_25_8_15_R4_B_scaffold_1135_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10834..11217
DNA (384bp) protein (128aa)
Transcriptional regulator, ArsR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T8_PHEZH
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCN18_25_8_15_R4_B_scaffold_1135_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11186..11644
DNA (459bp) protein (153aa)
Lactoylglutathione lyase, glyoxalase family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHI3_PHEZH
lactoylglutathione lyase, glyoxalase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_25_8_15_R4_B_scaffold_1135_15
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11711..13894)
DNA (2184bp) protein (728aa)
Quino(Hemo)protein alcohol dehydrogenase,PQQ-dependent {ECO:0000313|EMBL:CDO59735.1}; EC=1.1.2.- {ECO:0000313|EMBL:CDO59735.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Glucose dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA17_PHEZH
glucose dehydrogenase
SCN18_25_8_15_R4_B_scaffold_1135_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14110..14922
DNA (813bp) protein (271aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CTQ2_9BRAD
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJN12499.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
oxidoreductase
Displaying 16 items

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