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SCN18_25_8_15_R4_B_scaffold_1215

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1215_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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43..2007
DNA (1965bp) protein (655aa)
Oligopeptide transporter, OPT family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPA9_9GAMM
oligopeptide transporter, OPT family
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:AHG88509.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCN18_25_8_15_R4_B_scaffold_1215_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1990..2868)
DNA (879bp) protein (293aa)
Citryl-CoA lyase n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RZB8_MYCPH
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:EKF21349.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
HpcH/HpaI aldolase/citrate lyase family
SCN18_25_8_15_R4_B_scaffold_1215_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2865..3323)
DNA (459bp) protein (153aa)
MaoC family dehydratase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QZ22_9BURK
MaoC family dehydratase {ECO:0000313|EMBL:ETF04269.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
dehydratase, MaoC family protein
SCN18_25_8_15_R4_B_scaffold_1215_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3469..4083)
DNA (615bp) protein (205aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Carbonic anhydrase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAC8_9RHIZ
carbonate dehydratase
SCN18_25_8_15_R4_B_scaffold_1215_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4130..4654)
DNA (525bp) protein (175aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZD0_9RHIZ
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EIM29322.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acetyltransferase
SCN18_25_8_15_R4_B_scaffold_1215_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4661..5827)
DNA (1167bp) protein (389aa)
acyl-CoA dehydrogenase n=1 Tax=Paracoccus sp. N5 RepID=UPI0003618633
CaiA protein {ECO:0000313|EMBL:BAQ49908.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
Acyl-CoA dehydrogenase, C-terminal domain protein
SCN18_25_8_15_R4_B_scaffold_1215_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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6084..7928
DNA (1845bp) protein (615aa)
glutamate synthase n=1 Tax=Elioraea tepidiphila RepID=UPI00035C7FE1
glutamate synthase (NADPH) small chain
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_25_8_15_R4_B_scaffold_1215_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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7913..9745
DNA (1833bp) protein (611aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZE3_VARPE
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ADU36656.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCN18_25_8_15_R4_B_scaffold_1215_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9742..10797
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=mine drainage metagenome RepID=T0YFS0_9ZZZZ
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_25_8_15_R4_B_scaffold_1215_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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10804..11595
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase sdr id=4600742 bin=GWC2_Methylomirabilis_70_16 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_25_8_15_R4_B_scaffold_1215_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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11597..12217
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INZ2_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99412.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_25_8_15_R4_B_scaffold_1215_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12336..13313)
DNA (978bp) protein (326aa)
Lysine-2,3-aminomutase-related protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9X827_RHILT
Lysine 2,3-aminomutase {ECO:0000313|EMBL:KKB86712.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
lysine 2,3-aminomutase YodO family protein
SCN18_25_8_15_R4_B_scaffold_1215_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13310..13603)
DNA (294bp) protein (98aa)
Fosmidomycin resistance protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DLW5_9BURK
fosmidomycin resistance protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABO54414.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
Displaying 13 items

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