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SCN18_25_8_15_R4_B_scaffold_1508

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1508_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2..286
DNA (285bp) protein (95aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003633122
SCN18_25_8_15_R4_B_scaffold_1508_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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283..744
DNA (462bp) protein (154aa)
acetyl-CoA carboxylase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E56E
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCN18_25_8_15_R4_B_scaffold_1508_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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744..2090
DNA (1347bp) protein (449aa)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYB4_PARL1
acetyl-CoA carboxylase, biotin carboxylase
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABS64897.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1508_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2163..2558
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EAC
DoxX family protein {ECO:0000313|EMBL:KFX71671.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1508_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2668..3411
DNA (744bp) protein (248aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX59_TISMK
leucyl/phenylalanyl-tRNA--protein transferase
SCN18_25_8_15_R4_B_scaffold_1508_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3264..3845)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JED6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE68979.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1508_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3845..4351)
DNA (507bp) protein (169aa)
Mammalian cell entry related domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYB8_PARL1
Putative ABC transporter-binding protein {ECO:0000313|EMBL:GAK32947.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1508_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4372..4752)
DNA (381bp) protein (127aa)
NADH:ubiquinone oxidoreductase 17.2 kD subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HYB9_PARL1
NADH:ubiquinone oxidoreductase 17.2 kD subunit
NADH:ubiquinone oxidoreductase 17.2 kD subunit {ECO:0000313|EMBL:ABS64902.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1508_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5261..9016
DNA (3756bp) protein (1252aa)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RIA7_9RHIZ
ribonucleotide-diphosphate reductase subunit alpha
Ribonucleotide-diphosphate reductase alpha subunit {ECO:0000313|EMBL:ADZ70793.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_25_8_15_R4_B_scaffold_1508_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9084..9551)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003638735
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX14062.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCN18_25_8_15_R4_B_scaffold_1508_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9636..10244)
DNA (609bp) protein (203aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
gcvPB; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
glycine dehydrogenase subunit 2 n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B59081
Displaying 11 items

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