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SCN18_25_8_15_R4_B_scaffold_1860

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1860_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..171)
DNA (171bp) protein (57aa)
SCN18_25_8_15_R4_B_scaffold_1860_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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356..2008
DNA (1653bp) protein (551aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003AA7225
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein {ECO:0000313|EMBL:EAP89111.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
oligopeptide ABC transporter periplasmic protein
SCN18_25_8_15_R4_B_scaffold_1860_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2032..3309
DNA (1278bp) protein (426aa)
Oligopeptide ABC transporter n=1 Tax=uncultured bacterium BLR7 RepID=C0INR1_9BACT
Oligopeptide ABC transporter {ECO:0000313|EMBL:ACN58947.1}; TaxID=506523 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR7.;"
oligopeptide ABC transporter periplasmic protein
SCN18_25_8_15_R4_B_scaffold_1860_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3290..3565
DNA (276bp) protein (92aa)
ABC-type transport system periplasmic substrate-binding protein n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V957_HALED
ABC transporter periplasmic protein
ABC-type transport system periplasmic substrate-binding protein {ECO:0000313|EMBL:CBV43729.1}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
SCN18_25_8_15_R4_B_scaffold_1860_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3649..4311
DNA (663bp) protein (221aa)
Cytoplasmic membrane protein with extracellular domain n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RIA6_PHEZH
cytoplasmic membrane protein with extracellular domain
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_25_8_15_R4_B_scaffold_1860_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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4308..5099
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VH93_CAUST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG08751.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCN18_25_8_15_R4_B_scaffold_1860_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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5101..5775
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AYC9_9CAUL
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCN18_25_8_15_R4_B_scaffold_1860_trna_1
unknown

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5803..5876
DNA (74bp)
transferRNA Arg
SCN18_25_8_15_R4_B_scaffold_1860_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5899..6210)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A8V4_ALKEH
hypothetical protein
Tax=RBG_16_Actinobacteria_64_13_curated
SCN18_25_8_15_R4_B_scaffold_1860_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6223..6435)
DNA (213bp) protein (71aa)
SCN18_25_8_15_R4_B_scaffold_1860_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6618..7400)
DNA (783bp) protein (261aa)
Uncharacterized protein n=3 Tax=Comamonadaceae RepID=A1W9B7_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:CEI21670.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
polyphosphate kinase 2
SCN18_25_8_15_R4_B_scaffold_1860_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7450..8235)
DNA (786bp) protein (262aa)
Iron(III) dicitrate transport ATP-binding protein FecE n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQM8_RHOCS
Scaffold7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31912.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
fecE; iron(III) dicitrate transport ATP-binding protein FecE
SCN18_25_8_15_R4_B_scaffold_1860_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8232..9314)
DNA (1083bp) protein (361aa)
Hemin transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSP2_AZOS1
hemin transport system permease
Hemin transport system permease protein {ECO:0000313|EMBL:BAI71421.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCN18_25_8_15_R4_B_scaffold_1860_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9569..10444)
DNA (876bp) protein (292aa)
Periplasmic binding protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRL3_RHOCS
periplasmic binding protein
Periplasmic binding protein, putative {ECO:0000313|EMBL:ACI98099.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCN18_25_8_15_R4_B_scaffold_1860_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10503..11408
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000381D49B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY39412.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
Displaying 15 items

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