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SCN18_25_8_15_R4_B_scaffold_1914

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1914_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..467)
DNA (465bp) protein (155aa)
oxidoreductase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A6536
oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_8_15_R4_B_scaffold_1914_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(508..1404)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Thalassospira lucentensis RepID=UPI0003B3AFA9
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF09417.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
LysR family transcriptional regulator
SCN18_25_8_15_R4_B_scaffold_1914_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1409..2359)
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881, ECO:0000313|EMBL:CDO58735.1}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881, ECO:0000313|EMBL:CDO58735.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
trxB; thioredoxin reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B645B2
SCN18_25_8_15_R4_B_scaffold_1914_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2669..3145
DNA (477bp) protein (159aa)
Proline dehydrogenase transcriptional activator n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VA08_9RHOB
Putative leucine-responsive regulatory protein {ECO:0000313|EMBL:KCV82988.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanticum.;"
putative leucine-responsive regulatory protein
SCN18_25_8_15_R4_B_scaffold_1914_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3188..4846)
DNA (1659bp) protein (553aa)
Permeases of the major facilitator superfamily n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YRJ1_9CAUL
major facilitator superfamily permease
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCN18_25_8_15_R4_B_scaffold_1914_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4906..5472)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLC6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP66028.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1914_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5572..6993)
DNA (1422bp) protein (474aa)
PREDICTED: cationic amino acid transporter 2, vacuolar-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B17A
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ADG12180.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCN18_25_8_15_R4_B_scaffold_1914_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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7123..7920
DNA (798bp) protein (266aa)
Holin-like protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IDW0_9BRAD
Holin-like protein {ECO:0000313|EMBL:ERF80589.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
Displaying 8 items

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