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SCN18_25_8_15_R4_B_scaffold_1973

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1973_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1142)
DNA (1140bp) protein (380aa)
Aldehyde dehydrogenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY75_PARL1
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1973_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1308..2369
DNA (1062bp) protein (354aa)
diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B41377
Bll4347 protein {ECO:0000313|EMBL:CDO60940.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
diguanylate cyclase
SCN18_25_8_15_R4_B_scaffold_1973_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2422..3213
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY78_PARL1
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABS64861.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1973_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3305..5368
DNA (2064bp) protein (688aa)
Peptidase family M13 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QES3_BREDI
Peptidase family M13 {ECO:0000313|EMBL:EKY26478.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
M13 family peptidase
SCN18_25_8_15_R4_B_scaffold_1973_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5372..5767)
DNA (396bp) protein (132aa)
HesB/YadR/YfhF n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TEF3_PARBH
HesB/YadR/YfhF
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCN18_25_8_15_R4_B_scaffold_1973_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5780..6148)
DNA (369bp) protein (123aa)
FeS assembly SUF system protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9C6_9CAUL
PaaD-like protein (DUF59) involved in Fe-S cluster assembly {ECO:0000313|EMBL:CDO60935.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
FeS assembly SUF system protein
SCN18_25_8_15_R4_B_scaffold_1973_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6145..6600)
DNA (456bp) protein (152aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR40_RHOCS
NifU {ECO:0000313|EMBL:AIW60944.1}; TaxID=1551543 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. TH16.;"
NifU family SUF system FeS assembly protein
SCN18_25_8_15_R4_B_scaffold_1973_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6605..7855)
DNA (1251bp) protein (417aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
cysteine desulfurase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031B959D
SufS subfamily cysteine desulfurase
SCN18_25_8_15_R4_B_scaffold_1973_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7852..9102)
DNA (1251bp) protein (417aa)
FeS assembly protein SufD n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWP5_9PROT
FeS assembly protein SufD {ECO:0000313|EMBL:EDP63146.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
iron-sulfur cluster assembly protein SufD
SCN18_25_8_15_R4_B_scaffold_1973_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9099..9206)
DNA (108bp) protein (36aa)
transporter n=1 Tax=Ahrensia kielensis RepID=UPI00036332F0
sufC; feS assembly ATPase SufC
Displaying 10 items

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