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SCN18_25_8_15_R4_B_scaffold_2005

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_2005_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1483
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036C0D40
ABC transporter-like protein {ECO:0000313|EMBL:GAK44993.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
msbA; multidrug ABC transporter ATPase/permease
SCN18_25_8_15_R4_B_scaffold_2005_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1489..2778
DNA (1290bp) protein (430aa)
3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PJX6_9RHOB
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EJW11182.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCN18_25_8_15_R4_B_scaffold_2005_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2765..3757
DNA (993bp) protein (331aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI0003707922
lpxK; tetraacyldisaccharide 4'-kinase
SCN18_25_8_15_R4_B_scaffold_2005_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3754..4053
DNA (300bp) protein (100aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3G9_AZOL4
Lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:CBS85903.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
SCN18_25_8_15_R4_B_scaffold_2005_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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4054..4755
DNA (702bp) protein (234aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEX9_AZOBR
lauroyl acyltransferase
Lauroyl acyltransferase {ECO:0000313|EMBL:AIB11034.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_25_8_15_R4_B_scaffold_2005_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4698..5534)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003792D2F
Uncharacterized protein {ECO:0000313|EMBL:KFL37638.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
peptidase M23
SCN18_25_8_15_R4_B_scaffold_2005_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5553..5780)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF69_XANP2
hypothetical protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCN18_25_8_15_R4_B_scaffold_2005_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5827..7245)
DNA (1419bp) protein (473aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF68_XANP2
xseA; exodeoxyribonuclease VII large subunit
SCN18_25_8_15_R4_B_scaffold_2005_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7319..7567
DNA (249bp) protein (83aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:CBK81518.1}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:CBK81518.1};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Coprococcus catus GD/7 RepID=D4JAZ7_9FIRM
Displaying 9 items

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