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SCN18_25_8_15_R4_B_scaffold_2480

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_2480_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(231..791)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B3726D
Peptidase {ECO:0000313|EMBL:ETI64992.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_2480_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1119..1898
DNA (780bp) protein (260aa)
SCN18_25_8_15_R4_B_scaffold_2480_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2038..2457)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DB1B73
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH47752.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCN18_25_8_15_R4_B_scaffold_2480_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2510..3091)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) RepID=G4NFF6_MAGO7
Uncharacterized protein {ECO:0000313|EMBL:EHA47184.1}; TaxID=242507 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; Magnaporthe.;" source="Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (Rice; blast fungus) (Pyricularia oryzae).;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_2480_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3270..5303
DNA (2034bp) protein (678aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037F784B
threonyl-tRNA synthetase
SCN18_25_8_15_R4_B_scaffold_2480_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5718..6047
DNA (330bp) protein (110aa)
Translation initiation factor IF-3 n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC65_9RHIZ
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Displaying 6 items

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