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SCN18_25_8_15_R4_B_scaffold_2846

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_2846_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3..389
DNA (387bp) protein (129aa)
50S ribosomal protein L25 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUM1_9RHIZ
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rplY; 50S ribosomal protein L25
SCN18_25_8_15_R4_B_scaffold_2846_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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536..1147
DNA (612bp) protein (204aa)
Peptidyl-tRNA hydrolase {ECO:0000256|RuleBase:RU000673}; EC=3.1.1.29 {ECO:0000256|RuleBase:RU000673};; Flags: Fragment;; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003661839
SCN18_25_8_15_R4_B_scaffold_2846_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1147..2244
DNA (1098bp) protein (366aa)
GTP-binding protein YchF n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DFD265
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
GTP-dependent nucleic acid-binding protein EngD
SCN18_25_8_15_R4_B_scaffold_2846_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2241..2690
DNA (450bp) protein (150aa)
MaoC-like dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIW1_NITHX
MaoC-like dehydratase
MaoC-like dehydratase {ECO:0000313|EMBL:ABE63836.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_25_8_15_R4_B_scaffold_2846_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2687..3166
DNA (480bp) protein (160aa)
MaoC domain protein dehydratase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVD4_PARL1
Dehydratase {ECO:0000313|EMBL:GAK45946.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
dehydratase
SCN18_25_8_15_R4_B_scaffold_2846_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3163..3846
DNA (684bp) protein (228aa)
carboxymethylenebutenolidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002895492
Carboxymethylenebutenolidase {ECO:0000313|EMBL:CEJ11767.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
carboxymethylenebutenolidase
SCN18_25_8_15_R4_B_scaffold_2846_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3843..5603)
DNA (1761bp) protein (587aa)
Hypothetical oxidoreductase yuxG n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAP0_MAGSA
short chain dehydrogenase
Hypothetical oxidoreductase yuxG {ECO:0000313|EMBL:BAE49085.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Displaying 7 items

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