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SCN18_25_8_15_R4_B_scaffold_2898

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_2898_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3..422
DNA (420bp) protein (140aa)
Putative Glutathione transferase {ECO:0000313|EMBL:CCE10164.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CCE10164.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative Glutathione transferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUM6_9BRAD
glutathione S-transferase
SCN18_25_8_15_R4_B_scaffold_2898_trna_1
unknown

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510..581
DNA (72bp)
transferRNA Gln
SCN18_25_8_15_R4_B_scaffold_2898_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(685..837)
DNA (153bp) protein (51aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNG0_9SPHN
Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion {ECO:0000313|EMBL:CCW17018.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
cbb3-type cytochrome oxidase maturation protein
SCN18_25_8_15_R4_B_scaffold_2898_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(834..3074)
DNA (2241bp) protein (747aa)
Nitrogen fixation protein FixI n=1 Tax=Sphingomonas wittichii RepID=UPI0002E58A64
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABQ68157.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_25_8_15_R4_B_scaffold_2898_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3087..3890)
DNA (804bp) protein (268aa)
cytochrome C oxidase subunit I n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489846
Uncharacterized protein {ECO:0000313|EMBL:AJW29224.1}; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_2898_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3905..4087)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489845
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86148.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_25_8_15_R4_B_scaffold_2898_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4084..4965)
DNA (882bp) protein (294aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7Z8_9SPHN
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
cbb3-type cytochrome c oxidase subunit III
SCN18_25_8_15_R4_B_scaffold_2898_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4956..5126)
DNA (171bp) protein (57aa)
Cytochrome c oxidase subunit CcoQ {ECO:0000313|EMBL:AJW29227.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AJW29227.1};; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
Cbb3-type cytochrome oxidase component n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V794_SPHWW
Cbb3-type cytochrome oxidase component
SCN18_25_8_15_R4_B_scaffold_2898_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5132..5506)
DNA (375bp) protein (125aa)
Cytochrome c oxidase subunit CcoO {ECO:0000313|EMBL:CCW17024.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CCW17024.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
Cytochrome c oxidase subunit CcoO n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJT8_9SPHN
cbb3-type cytochrome c oxidase subunit II
Displaying 9 items

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