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SCN18_25_8_15_R4_B_scaffold_5793

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_5793_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28..693)
DNA (666bp) protein (222aa)
Components of type IV pilus n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5J4Z3_9RHIZ
Components of type IV pilus {ECO:0000313|EMBL:EGL66950.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
Putative pilus assembly protein cpaD; putative signal peptide
SCN18_25_8_15_R4_B_scaffold_5793_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(705..2201)
DNA (1497bp) protein (499aa)
Type II and III secretion system protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM3_PARL1
Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly {ECO:0000313|EMBL:CDO59910.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
type II and III secretion system protein
SCN18_25_8_15_R4_B_scaffold_5793_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2208..3014)
DNA (807bp) protein (269aa)
Flp pilus assembly CpaB n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ67_RHOP2
SAF domain-containing protein {ECO:0000313|EMBL:GAK45336.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Flp pilus assembly CpaB
SCN18_25_8_15_R4_B_scaffold_5793_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3089..3238)
DNA (150bp) protein (50aa)
CpaA2 pilus assembly protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030A11F7
Prepilin peptidase CpaA {ECO:0000313|EMBL:ERF83621.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
cpaA; flp pilus assembly protein CpaA
Displaying 4 items

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