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SCN18_25_8_15_R4_B_scaffold_4833

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_4833_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1..138
DNA (138bp) protein (46aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAMAP-Rule:MF_00051};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Serine hydroxymethyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=GLYA_NITHX
SCN18_25_8_15_R4_B_scaffold_4833_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(611..1039)
DNA (429bp) protein (143aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUD6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAN62039.1}; TaxID=1231340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter indonesiensis 5H-1.;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_4833_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1179..1637
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003800175
HTH-type transcriptional repressor NsrR {ECO:0000313|EMBL:CEJ11669.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Rrf2 family transcriptional regulator
SCN18_25_8_15_R4_B_scaffold_4833_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1874..2326
DNA (453bp) protein (151aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCN18_25_8_15_R4_B_scaffold_4833_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2365..2739)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Rheinheimera sp. A13L RepID=F7NUU6_9GAMM
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
SCN18_25_8_15_R4_B_scaffold_4833_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2758..3186)
DNA (429bp) protein (143aa)
MarR family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0YIX4_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:CDM65072.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
MarR family transcriptional regulator
SCN18_25_8_15_R4_B_scaffold_4833_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3297..3692
DNA (396bp) protein (132aa)
Putative chloride channel protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HWW1_BORPD
chloride channel protein
Putative chloride channel protein {ECO:0000313|EMBL:CAP43663.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Displaying 7 items

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