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SCN18_25_8_15_R4_B_scaffold_6007

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_6007_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1..246
DNA (246bp) protein (82aa)
NADH-dependent flavin oxidoreductase, Oye family protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZTQ5_9ALTE
12-oxophytodienoate reductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCN18_25_8_15_R4_B_scaffold_6007_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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443..1003
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVZ1_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB12153.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_25_8_15_R4_B_scaffold_6007_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1057..1335
DNA (279bp) protein (93aa)
Plasmid stabilization protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HAH1_RHOCA
StbC superfamily plasmid stability protein
Plasmid stability protein {ECO:0000313|EMBL:EJJ27712.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCN18_25_8_15_R4_B_scaffold_6007_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1332..1757
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
Plasmid stability protein StbB n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HQ30_RHOCA
PilT protein-like protein
SCN18_25_8_15_R4_B_scaffold_6007_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1754..3145
DNA (1392bp) protein (464aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Fumarate hydratase class II n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVX1_PARL1
fumC; fumarate hydratase
Displaying 5 items

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