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SCN18_25_8_15_R4_B_scaffold_1312_7

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(8918..9442)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPG2_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 172.0
  • Bit_score: 157
  • Evalue 8.30e-36
PadR-like family transcriptional regulator {ECO:0000313|EMBL:GAK45827.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 171.0
  • Bit_score: 169
  • Evalue 2.30e-39
PadR-like family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 172.0
  • Bit_score: 157
  • Evalue 2.30e-36

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
GTGGACGTCCGGACCATTTGCCTTGGGATTCTGACGCGCGGAAGCGCGACAGGCTATGAAATCAAGAAGCTGTTCCAGGAGGACGGCTACCAGCATTTCGTGGAGGCGAGCTTCGGCTCGATCTACCCCGCACTGGGCCGGCTGACCGAAGAGGGGCTGGTTTCCGTTCGTGCCGAGGCACAGACGAAGCGGCCGGACCGGAAAGTTTATTCCATCACCCCGGCCGGGCGGGCGGCCTTTCTGGGCGCCCTGATGCGGCCGCTGCCGGAAGACCGGCATCGCTCACCCTTTGTATTCGCCATGCTGTTTTCCCATCTGCTGCCGCAGGAACGGGTATCCGCCATGATCGACTGCTATATCGCGCAGACCGAGGGCAAGCTGGCCCAGATCAAGGGCGGTGAGCCGCATAGCTGTGGCGAGGCCTTTGTCAGCGGCCTTGGCAAGGTCATTTACGAAGCAAGCCTGAAATTCATTCGCAACCACCGCGCCGATGTCGAAAGACAGGCGGCGCATGCCGCCGAATAG
PROTEIN sequence
Length: 175
VDVRTICLGILTRGSATGYEIKKLFQEDGYQHFVEASFGSIYPALGRLTEEGLVSVRAEAQTKRPDRKVYSITPAGRAAFLGALMRPLPEDRHRSPFVFAMLFSHLLPQERVSAMIDCYIAQTEGKLAQIKGGEPHSCGEAFVSGLGKVIYEASLKFIRNHRADVERQAAHAAE*