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SCN18_25_8_15_R4_B_scaffold_1312

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_1312_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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1..906
DNA (906bp) protein (302aa)
(R)-citramalate synthase {ECO:0000313|EMBL:CDO60766.1}; EC=2.3.1.182 {ECO:0000313|EMBL:CDO60766.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS43_PARL1
putative alpha-isopropylmalate/homocitrate synthase family transferase
SCN18_25_8_15_R4_B_scaffold_1312_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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995..1906
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 17376 RepID=V6SW85_9BACI
transporter DMT superfamily protein
Tax=RBG_16_Spirochaete_67_19_curated
SCN18_25_8_15_R4_B_scaffold_1312_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1860..2471)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QW65_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEE47715.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
hypothetical protein
SCN18_25_8_15_R4_B_scaffold_1312_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2658..4544
DNA (1887bp) protein (629aa)
ABC transporter related n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS51_PARL1
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABS62734.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1312_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4558..7815)
DNA (3258bp) protein (1086aa)
Acriflavin resistance protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPG0_PARL1
Acriflavin resistance protein {ECO:0000313|EMBL:ABS61793.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
acriflavin resistance protein
SCN18_25_8_15_R4_B_scaffold_1312_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7815..8909)
DNA (1095bp) protein (365aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPG1_PARL1
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS61794.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_1312_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8918..9442)
DNA (525bp) protein (175aa)
Transcriptional regulator, PadR-like family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPG2_PARL1
PadR-like family transcriptional regulator {ECO:0000313|EMBL:GAK45827.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
PadR-like family transcriptional regulator
SCN18_25_8_15_R4_B_scaffold_1312_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9583..10110)
DNA (528bp) protein (176aa)
Putative cold shock protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZG38_AZOL4
Cold-shock protein {ECO:0000313|EMBL:KJR64002.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Putative cold shock protein
SCN18_25_8_15_R4_B_scaffold_1312_9
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10336..12129
DNA (1794bp) protein (598aa)
Glycoside hydrolase|GH5 {ECO:0000313|EMBL:CDO60621.1}; EC=3.2.1.- {ECO:0000313|EMBL:CDO60621.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRC3_PARL1
hypothetical protein
Displaying 9 items

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