ggKbase home page

SCN18_25_8_15_R4_B_scaffold_1163_17

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(13989..14357)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ACB79975.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACB79975.1};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 119.0
  • Bit_score: 107
  • Evalue 7.40e-21
DNA polymerase III subunit gamma/tau n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000347940A similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 130.0
  • Bit_score: 109
  • Evalue 2.40e-21
DNA polymerase III subunits gamma and tau similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 119.0
  • Bit_score: 107
  • Evalue 1.50e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGCTCAAGGTGAATATCGAAAACGACATCCATCTGGTGCGGCTGGAGCCGGGGCAACTCGAATTCCGCCCCAGCGCCAAGGCGCCTCGGTCACTTTCCGCCGATCTGACGCAGAAGCTGCGGGAATGGACGGGCACGCGCTGGATGGTGACGGTCGCGCGTGAAGGCGGCGCGCCGACCCTGGCCGAACAGAAGCGCGCCGCGCGCGATGCCGCCTTCGATCGCGTGCGGCAGGAGCCGTTGGTGCGTGCGGTGCTGGATCGTTTTCCGGGCGCGGAAATCATCGCGGTGCGCCAGCCCGAAGCCGAAGCCCCGCCCGAAGCCGCAATACCCGAATCCGCCATGGATGAATCCGGAGATATGCCATGA
PROTEIN sequence
Length: 123
VLKVNIENDIHLVRLEPGQLEFRPSAKAPRSLSADLTQKLREWTGTRWMVTVAREGGAPTLAEQKRAARDAAFDRVRQEPLVRAVLDRFPGAEIIAVRQPEAEAPPEAAIPESAMDESGDMP*