ggKbase home page

SCN18_25_8_15_R4_B_scaffold_2100_7

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(7127..7237)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTN4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 35.0
  • Bit_score: 61
  • Evalue 1.30e-07
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 35.0
  • Bit_score: 61
  • Evalue 3.60e-08
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS63267.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 35.0
  • Bit_score: 61
  • Evalue 1.80e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 111
AAAGGCCTGCCGGAGGACATCGCACAGGGGGTGCTGTTCCTGGCCAGCGATGACTCGCGTTACATGACCGGCACGGAACTGGTGATCGACGGCGGCATGTCCACCCGCTAA
PROTEIN sequence
Length: 37
KGLPEDIAQGVLFLASDDSRYMTGTELVIDGGMSTR*