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SCN18_25_8_15_R4_B_scaffold_2100

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_2100_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3..284
DNA (282bp) protein (94aa)
Acyl-CoA dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGK1_PHEZH
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ACG78907.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCN18_25_8_15_R4_B_scaffold_2100_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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354..1790
DNA (1437bp) protein (479aa)
aromatic ring hydroxylase (EC:1.14.14.9)
Aromatic ring hydroxylase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GSV0_9SPHN
Aromatic ring hydroxylase {ECO:0000313|EMBL:EPR15226.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
SCN18_25_8_15_R4_B_scaffold_2100_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1878..2690)
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R811_PHEZH
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_25_8_15_R4_B_scaffold_2100_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2841..3473
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003008001
Uncharacterized protein {ECO:0000313|EMBL:GAO40247.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Hopanoid biosynthesis associated membrane protein HpnM
SCN18_25_8_15_R4_B_scaffold_2100_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3654..4190)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0003727100
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_25_8_15_R4_B_scaffold_2100_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4316..6913)
DNA (2598bp) protein (866aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003094874
Uncharacterized protein {ECO:0000313|EMBL:GAO40241.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hopanoid biosynthesis associated RND transporter-like protein HpnN
SCN18_25_8_15_R4_B_scaffold_2100_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7127..7237)
DNA (111bp) protein (37aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTN4_PARL1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS63267.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 7 items

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