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SCN18_25_8_15_R4_B_scaffold_935_17

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(16628..17527)

Top 3 Functional Annotations

Value Algorithm Source
hopanoid biosynthesis associated protein HpnK n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B790ED similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 301.0
  • Bit_score: 323
  • Evalue 1.50e-85
Cellobiose phosphotransferase system celC {ECO:0000313|EMBL:GAO55488.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 289.0
  • Bit_score: 325
  • Evalue 7.20e-86
hopanoid biosynthesis associated protein HpnK similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 295.0
  • Bit_score: 320
  • Evalue 4.70e-85

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
TTGATCAAGGGCCTGATTGTCACGGCGGACGATTTCGGCGCCGCGCCGGAAGTCAACGCGGCGGTCGAGACCGCACACCGTGATGGTATTCTCTCTGCTGCCAGCCTGATGGTGGCGGCCCCTGCGGCAAAAGATGCGGTGGCGCTGGCAAACCGTCTGCCGGGTTTGCGTGTGGGCCTTCATATCGTGCTGGTGGAAGGCCGCCCGGTTCTGTTGCCTTCACGGATTCCCGATCTGGGCGATGCTTCAGGTCAGTTCCGTACCGATATGGCCATGACCGGCGCGCGCATGTTTTTTCTGCCGCATGTGCGCCGTCAACTCACGGCTGAGATTACCGCCCAGTTCGAAGCTTTTCGCGCCACGGGTCTCGCCCTCGATCACGTCAATGCGCACAAGCATTTTCATCTCCATCCCACCATTGCGAACACCATCCTGCGTATCGGCCGCCGTTTCGGCATGACCGGGCTGCGAGTGCCGCGCGAACCGCGCGCGGTCATAGATGCGGTGGCGTCGAATAGTCCTGTCTCGCCCCCGCAGGGGGAGGGGGGCAGGGTGAGGGGGAATGGAGGTGGACTCGAATCCCTCGCGCACCTGTTCGCTGCCCGTCTTGCACGGCGCATGCGCGGGCAGGGGCTGCTGGTGCCGGATCGGGTCTTCGGCCTCAGATGGTCGGGTGCGATGACGCGTGATCGCCTGCTGGGGTTGATTGGCCGCCTACCTGATGGGTTGAGCGAGATTTATCTCCATCCCGCAACCGGGTCCTATCCGGGGTCGGCCCCCGGTTACCGCTATGCGGAGGAGTTGGCGGCGCTTACCGACCCGGCTGTTGTCGCCGCGGCGTCGGGCTTTGCGCGCGGCGGATTCGCCGATTTTCAGGGCGGCAAATCGCGCGCAGCCTGA
PROTEIN sequence
Length: 300
LIKGLIVTADDFGAAPEVNAAVETAHRDGILSAASLMVAAPAAKDAVALANRLPGLRVGLHIVLVEGRPVLLPSRIPDLGDASGQFRTDMAMTGARMFFLPHVRRQLTAEITAQFEAFRATGLALDHVNAHKHFHLHPTIANTILRIGRRFGMTGLRVPREPRAVIDAVASNSPVSPPQGEGGRVRGNGGGLESLAHLFAARLARRMRGQGLLVPDRVFGLRWSGAMTRDRLLGLIGRLPDGLSEIYLHPATGSYPGSAPGYRYAEELAALTDPAVVAAASGFARGGFADFQGGKSRAA*