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SCN18_25_8_15_R4_B_scaffold_2173_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 643..2016

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing CheY-like receiver, AAA-t ype ATPase, and DNA-binding domains n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZL9_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 456.0
  • Bit_score: 624
  • Evalue 8.20e-176
flbD; response regulator containing chemotaxis protein CheY, AAA-t ype ATPase, and DNA-binding domains similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 456.0
  • Bit_score: 624
  • Evalue 2.30e-176
Two component sigma-54 specific Fis family transcriptional regulator {ECO:0000313|EMBL:GAK46482.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 453.0
  • Bit_score: 624
  • Evalue 1.10e-175

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGCGTCTTCTCATCGTCGGGCAATTGCAGGGCCAGCTTGGGCTGGCCACCAAGATCGCGATCGAGCGCGGTGCCAAAGTCACCCACGCCGGCAACATCGAAATGGCGCTGGCCGAACTCCGGTCCGGGCGTGGCGCCGATCTTGCCATGGCGGATGTCACCCTCGACATCGGGCAATTGGTGCGCGGCCTCGCCGCCGAACGCATCTGCACACCCGTGGTCGCTTGCGGCATTGGAACCGATGCGCGCCGCGCGGTGGATGCGATCCGCGCCGGTGCCAAGGAATATCTGCCGCTGCCGCCGGACCCCGAATTGATCGCGGCCGTGCTGGCCGCCGTGGCGGACGAAAGCCATCAGCTTATCCACGAAGATGAAGCGATGAGCGCGGTGCTGGCACTGGCCGATCAGGTAGCGGGAAGCGAAGCCTCCATCCTGATCACCGGCGAATCCGGTACCGGCAAGGAGGTGATGGCGCGTTACATCCACAAGAAATCGGCCCGCGCCGACAAGCCCTTCATTTCGGTCAATTGTGCGGCTATCCCTGAAAACCTTCTCGAATCCGAATTGTTCGGCCATGAGAAGGGCGCCTTCACCGGCGCCATCGCGCGCCGCGTCGGCAAGTTCGAGGAGGCCGATGGCGGCACCCTTCTGCTGGACGAAATCAGCGAGATGGATGCGCGCCTGCAGGCAAAACTTCTGCGCGCCATTCAGGAACGCGAGATCGACCGCGTCGGCGGCACCAAGCCGGTCAAGGTCAACATCCGCATCATCGCGACATCGAACCGCGATCTGGCCGAAGCGGTGCGGCACAACACCTTCCGCGAAGACCTGCTTTACCGGCTGAACGTGGTCAATCTGCGCCTGCCCGCCTTGCGCGAACGCCCGAAGGATATTCTGGCGCTGGCCCGGCACTTCGCCCACAAATATGCGGAAGCCAACAGCGTGCCGCACCGCCCGATTGCGGCAGTGACCGAGCGGCTGCTGATTTCCCATCCCTGGCGCGGCAATGTGCGCGAACTGGAAAACACCATCCACCGTGCCGTGCTGCTCTCGACCGGCGGCGAAATCGTACCGGAAGCGATCCGCCTGCCCGATGGCACGCAGGTCGGCAACGGCATCACAAGCCAGCCGGGCGGCGCGGTGCAGTTGGCCATTGAAAACGCGGCCGTGGTGACGCGCGGTCTTGTCGGCCGCACGGTGGCGGAGGTTGAGCGCGATCTGATCCTGGACACGCTGGACCATTGCCTGGGCAACCGCACCCACGCCGCCAATATTCTCGGCATCTCGATCCGCACATTGCGCAACAAGCTGCGGGAATACAGCCAGTCGGGCCTTGCCATTCCCAATCCGGGCGAAACACGGCTGGCCGGATAA
PROTEIN sequence
Length: 458
MRLLIVGQLQGQLGLATKIAIERGAKVTHAGNIEMALAELRSGRGADLAMADVTLDIGQLVRGLAAERICTPVVACGIGTDARRAVDAIRAGAKEYLPLPPDPELIAAVLAAVADESHQLIHEDEAMSAVLALADQVAGSEASILITGESGTGKEVMARYIHKKSARADKPFISVNCAAIPENLLESELFGHEKGAFTGAIARRVGKFEEADGGTLLLDEISEMDARLQAKLLRAIQEREIDRVGGTKPVKVNIRIIATSNRDLAEAVRHNTFREDLLYRLNVVNLRLPALRERPKDILALARHFAHKYAEANSVPHRPIAAVTERLLISHPWRGNVRELENTIHRAVLLSTGGEIVPEAIRLPDGTQVGNGITSQPGGAVQLAIENAAVVTRGLVGRTVAEVERDLILDTLDHCLGNRTHAANILGISIRTLRNKLREYSQSGLAIPNPGETRLAG*