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SCN18_25_8_15_R4_B_scaffold_2173

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_2173_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2..625
DNA (624bp) protein (208aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV61_PARL1
Two component sigma-54 specific Fis family transcriptional regulator {ECO:0000313|EMBL:GAK46482.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
two component sigma-54 specific Fis family transcriptional regulator
SCN18_25_8_15_R4_B_scaffold_2173_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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643..2016
DNA (1374bp) protein (458aa)
Response regulator containing CheY-like receiver, AAA-t ype ATPase, and DNA-binding domains n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZL9_POLGS
flbD; response regulator containing chemotaxis protein CheY, AAA-t ype ATPase, and DNA-binding domains
Two component sigma-54 specific Fis family transcriptional regulator {ECO:0000313|EMBL:GAK46482.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCN18_25_8_15_R4_B_scaffold_2173_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2051..4174
DNA (2124bp) protein (708aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV60_PARL1
flhA; flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ABS63793.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_25_8_15_R4_B_scaffold_2173_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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4178..5278
DNA (1101bp) protein (367aa)
Flagellar biosynthesis protein-like protein (FlhF) n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UFM6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIF24766.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
GTP-binding signal recognition particle
SCN18_25_8_15_R4_B_scaffold_2173_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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5275..6093
DNA (819bp) protein (273aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4F297
cobyrinic acid ac-diamide synthase
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;"
SCN18_25_8_15_R4_B_scaffold_2173_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6125..6553)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZNW9_9ALTE
Putative membrane protein {ECO:0000313|EMBL:CDR33042.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
DoxX protein
SCN18_25_8_15_R4_B_scaffold_2173_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6568..6825)
DNA (258bp) protein (86aa)
Displaying 7 items

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