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SCN18_25_8_15_R4_B_scaffold_2193_5

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(5067..5813)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E952 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 244.0
  • Bit_score: 250
  • Evalue 1.00e-63
TonB-dependent receptor {ECO:0000313|EMBL:KDA01529.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 220.0
  • Bit_score: 245
  • Evalue 6.00e-62
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 248.0
  • Bit_score: 166
  • Evalue 9.40e-39

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGTCACTATCCATCACGCGACGCTGGGATTTACGCATCACTTTTTGCGCCCCAAGGGCCCTCACCATGGGCGGGCTGATGCTTCTTGCCACGCCGTGCGGTCACGCCATGGCTCAAACGACCGTAGGAACGGGAATCGAGACTGTGGTGGTGACGGCCGAAAAGCGCGAGGAAAACATCCTCAACGTCGGCATCAATATTACCAGTCTTTCAGCCGACGAACTCCGTACCTCGCGCATAACGACGGCGACCGATCTGGCCACCCAGATTCCCAACGTGGATGTGAAAACAAATGTTCCCGGCGCACAACAGATCATAACCGTGCGCGGCGTGGGCCTGGACGATTTTTCCTCCACCAACAATTCGAGTGTCGGCGTATATGTCGACGATGTGTTTCTCGCCTCTTTCGCCGAAATGGATTTCAATATGTACGACCTGGCGCGGGTCGAAGTATTGAAAGGACCGCAAGGCACACTTTACGGCCGTAACTCGACCGCAGGTGCAATCAACATCATCTCCGCACGCCCCTCGCTGGATGGCTTCGCAGCCAATATCTCAGCCGGTTACGGCAATTACGGCATATTCGAAACGGATGGCATGCTGAACTTGCCAGTGACCGATACGCTAGCGGTGCGCTTCGCCGGTAAAATTGTGCATCAATCTGACGGTTACTGGTTCAGCCGCGTGCTCGATCGCGATCTGGGGCGGCAAAGCATTTTTCTCGGGCGCGCACAAGCGCTGTGGTAG
PROTEIN sequence
Length: 249
VSLSITRRWDLRITFCAPRALTMGGLMLLATPCGHAMAQTTVGTGIETVVVTAEKREENILNVGINITSLSADELRTSRITTATDLATQIPNVDVKTNVPGAQQIITVRGVGLDDFSSTNNSSVGVYVDDVFLASFAEMDFNMYDLARVEVLKGPQGTLYGRNSTAGAINIISARPSLDGFAANISAGYGNYGIFETDGMLNLPVTDTLAVRFAGKIVHQSDGYWFSRVLDRDLGRQSIFLGRAQALW*