ggKbase home page

SCN18_25_8_15_R4_B_scaffold_2193_6

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 5971..7017

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J2HFQ2_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 338.0
  • Bit_score: 251
  • Evalue 6.50e-64
Transcriptional regulator {ECO:0000313|EMBL:EJL34448.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 338.0
  • Bit_score: 251
  • Evalue 9.10e-64
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 340.0
  • Bit_score: 218
  • Evalue 2.90e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGCTGTTGCCCGCTTCCACTGTGCTGACCCAGGCTTCCGCCAAGGAAGCCAGACGGACCTTGCTGCTCGATGCAGCGGCCGCGGAGTTCAATGCGCGCGGAATTTCGGGGGCATCGCTCAGCAGAATTGCCAAGGCTGTCGGCATCGGCCGCGCTGCGCTCTATTACTATGTGAAGGATCGCAACGATCTGGCGGCGCAGTGCTATCGCAAGAGCTGCGAGATCATGGCTGGCGATCTGCACACTGCCCTGCAGGCTGCAGATACGGGACTTGATCGTGTTCTGGTTTTTCTGCGTCTGTCGCTCGATCCTGGGCGCCCGCAGTCGGCGATCTTGAGCGAGGTTGCCTATCTGCAAAGTGCGACGCGCCGCGTCATTGCGACTATGCGAAACGCCAATGTCGAGGCTCTGCGTACTTTGATTCGCGGAGGTATCGAGGATGGGAGTATCCGCACCTGCGACGACGAGATCGTTGCGCAGACACTGATCGGCATAATCAACTGGATTCCGTTGTCGATAGATTGGGTGGAAGGTACCGATGAAGATTTCCGTACCCGCACCGTTGAAGCGTTGTGCGATCTCACCATCTCCGGCGAGGCACGGGATCGGGATTACCGCTTTGTGCCGACACTACGGATCGAATCCTTTTTTCCGGCGCCGGCAAAAGCTTTCGATCGTCGCGCAGTAGCCGATTCCAAGGTAGAACAATTGCTGATGACGGCCTCCCAATTGTTCAACCAGCGGGGGATCGACGGGGTTTCGCTGGAAGATATTACCAGGGAGCTGGGTGCCACCAAGGGTGCCTTTTATCACTATCTGAATAATAAAACTGAGCTTGTGGCGCGTTGCTATAAACGTGCGTTTTCGCTCTACGAACACTTTGTCGAAGCTGCGGCTGGTCGCGGGGAAAATGCTCTCGATCGCGCGATGTACGGCCTTTATCTCAATATACAGGCCCATGCCTCCGGCCTGTCACCGCTGATCCAGACGGTTGGCGTCACCGCATTGGCGCCGGCTGTGAAGCGCGACATCACCCGGCGCGCGCGC
PROTEIN sequence
Length: 349
MLLPASTVLTQASAKEARRTLLLDAAAAEFNARGISGASLSRIAKAVGIGRAALYYYVKDRNDLAAQCYRKSCEIMAGDLHTALQAADTGLDRVLVFLRLSLDPGRPQSAILSEVAYLQSATRRVIATMRNANVEALRTLIRGGIEDGSIRTCDDEIVAQTLIGIINWIPLSIDWVEGTDEDFRTRTVEALCDLTISGEARDRDYRFVPTLRIESFFPAPAKAFDRRAVADSKVEQLLMTASQLFNQRGIDGVSLEDITRELGATKGAFYHYLNNKTELVARCYKRAFSLYEHFVEAAAGRGENALDRAMYGLYLNIQAHASGLSPLIQTVGVTALAPAVKRDITRRAR