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SCN18_25_8_15_R4_B_scaffold_1719_7

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(6032..6910)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRL8_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 222.0
  • Bit_score: 352
  • Evalue 3.80e-94
Two-component system response regulator QseB {ECO:0000313|EMBL:CDO60685.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 222.0
  • Bit_score: 353
  • Evalue 2.40e-94
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 222.0
  • Bit_score: 352
  • Evalue 1.10e-94

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGCCGCGACCGCGGGTCCTACGGCGCGCCGCCACCGGCCACCTATGATCGCGGTGGATATCAGGGCCGTGGCTATGACCGCCGTGGCGGTTATGATCGGGGCGGATATGACCGTGGCGATTACCGGCGCGGCCGGCCGGATGCGCCAGGCGGGCGTGGTAACCGGGGCCGTGGTCACAAGGGCGATTAGGCATATGCGTATTCTTGTGGTGGAAGACGATGCCGATCTTCAGCGCCTGCTGAAAAAGGCGCTGAACGATGCGGGCTATGTCGTGGATACCGCGGCGGATGGGGAGGAGGGGCACTTCCTCGGCGATACGGAACCTTATGATGTGGTGATCCTCGATCTCGGTCTGCCGAAAATCGATGGCGTGCGCGTGCTCGAACGCTGGCGCAAGGATGGCCGCACCATGCCGGTATTGATCCTCACGGCGCGCGATCGCTGGTCGGACAAGGTCGCCGGGTTTGATGCCGGCGCCGACGATTATCTGGCCAAGCCGTTCTATACCGAAGAACTACTGGCCCGTGTTCGCGCCCTGATGCGCCGCGCGGCCGGGCTTGCCACCGCCGAAATCGATGTCGGCCCCTTGCGCATCGATACGCGCGCCAGCCGCGTCACAATCAATGGCAATCCGGTCAAGCTGACTTCGCTGGAATACCGGCTGCTGTCCTACCTTGCCCATCATCGCGGCAAGGTCGTCTCGCGCACCGAACTGGTCGAGCATCTTTACGATCAGGATTTCGACCGCGATTCCAATACGATTGAAGTCTTCGTCGGACGCCTGCGCAAAAAACTCGACGCCAATCTCATTCAGACGGTACGCGGCCTTGGCTACTGCCTCGACGATCCGGGCTCTGCTGACAAGGCTGAGGCCTAG
PROTEIN sequence
Length: 293
MAATAGPTARRHRPPMIAVDIRAVAMTAVAVMIGADMTVAITGAAGRMRQAGVVTGAVVTRAIRHMRILVVEDDADLQRLLKKALNDAGYVVDTAADGEEGHFLGDTEPYDVVILDLGLPKIDGVRVLERWRKDGRTMPVLILTARDRWSDKVAGFDAGADDYLAKPFYTEELLARVRALMRRAAGLATAEIDVGPLRIDTRASRVTINGNPVKLTSLEYRLLSYLAHHRGKVVSRTELVEHLYDQDFDRDSNTIEVFVGRLRKKLDANLIQTVRGLGYCLDDPGSADKAEA*