ggKbase home page

SCN18_25_8_15_R4_B_scaffold_3679_6

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(4150..4560)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037B786F similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 137.0
  • Bit_score: 159
  • Evalue 1.30e-36
Chaperone DnaJ {ECO:0000313|EMBL:AHN97596.1}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 136.0
  • Bit_score: 179
  • Evalue 1.70e-42
cbpA; curved DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 137.0
  • Bit_score: 158
  • Evalue 8.20e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
CAGCAAATCCGCCTGCGCGGACAGGGTGGGCCCGGCGTGAACGGCGGACCGCAAGGCGATGTGATGATCCAGGTCTCGGTCGCCCCGCACCCCTATTTCACCCGCGACGGCAACAATCTGCGCATGGATCTGCCGGTGACGCTGAAGGAGGCCGTGCTGGGCGGCAAGGTGCAGGTGCCGACCCTGACAGGCGCGGTGACGGTGACCGTTCCCGCCAATTCCAACTCGGGCACCGTGTTGCGCCTGAAAGGCAAAGGCATTCCCGCACGCGGATCCGCCAGCGGTGGCGAGGCCGCAGGCGATCTTTATGTGCGGCTGGTGGTGACCCTGCCGGACAAGGCGGATGCGAAACTGAAAACCTTCATCGAAGGTTGGGACGCAAGTTACGACCCGCGCGCGAAGATGAAATAG
PROTEIN sequence
Length: 137
QQIRLRGQGGPGVNGGPQGDVMIQVSVAPHPYFTRDGNNLRMDLPVTLKEAVLGGKVQVPTLTGAVTVTVPANSNSGTVLRLKGKGIPARGSASGGEAAGDLYVRLVVTLPDKADAKLKTFIEGWDASYDPRAKMK*