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SCN18_25_8_15_R4_B_scaffold_3679

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R4_B_scaffold_3679_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(54..518)
DNA (465bp) protein (155aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
Chorismate synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=AROC_PHEZH
aroC; chorismate synthase
SCN18_25_8_15_R4_B_scaffold_3679_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(530..1159)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IMJ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83899.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
phosphoglycerate kinase
SCN18_25_8_15_R4_B_scaffold_3679_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1149..1973)
DNA (825bp) protein (275aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
fabI2; NADH dependent enoyl-[acyl-carrier-protein] reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5B1_9RHOB
SCN18_25_8_15_R4_B_scaffold_3679_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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2114..3364
DNA (1251bp) protein (417aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH32_PHEZH
Beta-lactamase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_25_8_15_R4_B_scaffold_3679_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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3435..4028
DNA (594bp) protein (198aa)
Phosphoglycerate mutase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSJ7_OPITP
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ACB73854.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCN18_25_8_15_R4_B_scaffold_3679_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4150..4560)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037B786F
Chaperone DnaJ {ECO:0000313|EMBL:AHN97596.1}; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
cbpA; curved DNA-binding protein
Displaying 6 items

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