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SCN18_25_8_15_R5_B_scaffold_48

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Displaying items 1-30 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R5_B_scaffold_48_1
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..581)
DNA (579bp) protein (193aa)
Putative uncharacterized protein id=3283403 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Moritella sp. PE36 genus=Moritella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
SCN18_25_8_15_R5_B_scaffold_48_2
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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614..1348
DNA (735bp) protein (245aa)
SCN18_25_8_15_R5_B_scaffold_48_trna_1
unknown

Not on your lists

1245..1317
DNA (73bp)
transferRNA Ala
SCN18_25_8_15_R5_B_scaffold_48_trna_2
unknown

Not on your lists

1334..1406
DNA (73bp)
transferRNA Glu
SCN18_25_8_15_R5_B_scaffold_48_trna_3
unknown

Not on your lists

1631..1704
DNA (74bp)
transferRNA Asp
SCN18_25_8_15_R5_B_scaffold_48_3
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1868..4054
DNA (2187bp) protein (729aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Putative peptidyl dipeptidase/oligopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ16_9GAMM
Putative peptidyl dipeptidase/oligopeptidase {ECO:0000313|EMBL:EIL92457.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCN18_25_8_15_R5_B_scaffold_48_4
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4120..4629)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031870EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX13640.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCN18_25_8_15_R5_B_scaffold_48_5
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4743..7592)
DNA (2850bp) protein (950aa)
Autotransporter serine protease n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVJ8_9GAMM
Autotransporter serine protease {ECO:0000313|EMBL:EIM03490.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
autotransporter-associated beta strand repeat protein
SCN18_25_8_15_R5_B_scaffold_48_6
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7743..8918
DNA (1176bp) protein (392aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AIF47541.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AIF47541.1};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Acetoacetyl-CoA thiolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAZ2_9GAMM
SCN18_25_8_15_R5_B_scaffold_48_7
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9073..9468
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WPP2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG89650.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_48_8
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9669..11276
DNA (1608bp) protein (536aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8P8_9GAMM
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:EIL95839.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
methylcrotonoyl-CoA carboxylase
SCN18_25_8_15_R5_B_scaffold_48_9
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11289..11849)
DNA (561bp) protein (187aa)
hypothetical protein
Blr6985 protein id=4954740 bin=GWC2_OP3-like_45_7 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCN18_25_8_15_R5_B_scaffold_48_10
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11869..12729)
DNA (861bp) protein (287aa)
Iron permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Q9_9GAMM
Iron permease {ECO:0000313|EMBL:EIL96200.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
high-affinity Fe2+/Pb2+ permease
SCN18_25_8_15_R5_B_scaffold_48_11
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12737..13075)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8B0E
Uncharacterized protein {ECO:0000313|EMBL:EIL96199.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_48_12
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13289..14083
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X4_9GAMM
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIL94865.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enoyl-CoA hydratase/carnithine racemase
SCN18_25_8_15_R5_B_scaffold_48_13
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14086..14475
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368776C
Glyoxalase {ECO:0000313|EMBL:AKC87919.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
SCN18_25_8_15_R5_B_scaffold_48_14
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14695..15216
DNA (522bp) protein (174aa)
Cupin n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HBE7_9BURK
Cupin {ECO:0000313|EMBL:ESH86934.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
cupin
SCN18_25_8_15_R5_B_scaffold_48_15
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15219..15737
DNA (519bp) protein (173aa)
Cupin n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA77_9GAMM
Cupin {ECO:0000313|EMBL:KGI78403.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cupin
SCN18_25_8_15_R5_B_scaffold_48_16
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15737..17743
DNA (2007bp) protein (669aa)
acetyl/propionyl-CoA carboxylase, alpha subunit (EC:6.3.4.14 6.4.1.4)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X3_9GAMM
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:EIL94864.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCN18_25_8_15_R5_B_scaffold_48_17
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17965..19275
DNA (1311bp) protein (437aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM7_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90568.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCN18_25_8_15_R5_B_scaffold_48_18
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19284..20516
DNA (1233bp) protein (411aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM6_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90567.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
SCN18_25_8_15_R5_B_scaffold_48_19
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20532..21839
DNA (1308bp) protein (436aa)
ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL9_9GAMM
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87976.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R5_B_scaffold_48_20
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21853..23085
DNA (1233bp) protein (411aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NDN4_9GAMM
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87977.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R5_B_scaffold_48_21
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23085..24389
DNA (1305bp) protein (435aa)
ABC transporter ATP-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B5120
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX12149.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCN18_25_8_15_R5_B_scaffold_48_22
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24391..25620
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VIZ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87189.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ABC-type antimicrobial peptide transport system, permease component
SCN18_25_8_15_R5_B_scaffold_48_23
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25693..26589
DNA (897bp) protein (299aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA74_9GAMM
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EIL96365.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hydroxymethylglutaryl-CoA lyase
SCN18_25_8_15_R5_B_scaffold_48_24
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26756..27244
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLL0_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL88101.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyltransferase, N-acetylglutamate synthase
SCN18_25_8_15_R5_B_scaffold_48_25
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27303..28070
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLL2_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL88103.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCN18_25_8_15_R5_B_scaffold_48_26
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28191..28754
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMK9_9GAMM
Elongation factor P {ECO:0000313|EMBL:EIM00701.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
elongation factor P
SCN18_25_8_15_R5_B_scaffold_48_27
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29108..30640
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360779C
Amino acid permease {ECO:0000313|EMBL:EIM02066.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amino acid transporter
Displaying items 1-30 of 293 in total

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